RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RSAD2Q8WXG1 361 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 SDCCAG3Q96C92 435 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 TRIM4Q9C037 500 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 SUDS3Q9H7L9 328 aaPredicted RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 MYO1AQ9UBC5 1043 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 STAM2O75886 525 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 MAGEA1P43355 309 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 ZSCAN26Q16670 478 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 DDX41Q9UJV9 622 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 PA2G4Q9UQ80 394 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 BZW2Q9Y6E2 419 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 SGSM2O43147 1006 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 PPP1R2P3Q6NXS1 205 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 PLIN2Q99541 437 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 KIAA0232Q92628 1395 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 EYA2O00167 538 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 SOS2Q07890 1332 aaPredicted RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 GOLGA8CPA6NN73 597 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 MORC3Q14149 939 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 RSPH3Q86UC2 560 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 PASKQ96RG2 1323 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 NUP153P49790 1475 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 LSM14BQ9BX40 385 aaKnown RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 ZNF500O60304 480 aaPredicted RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 MTX1Q13505 466 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 CHST3Q7LGC8 479 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 CAPS2Q9BXY5 557 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 F8W031 263 aaPredicted RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 ANXA1P04083 346 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 DDX21Q9NR30 783 aaKnown RBP eCLIP8.78□□□□□ -1
LIMD1-201ENST00000273317 ZBTB21Q9ULJ3 1066 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 RGS12O14924 1447 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 DBN1Q16643 649 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 HACE1Q8IYU2 909 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 DSCC1Q9BVC3 393 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 ZNF277Q9NRM2 450 aaPredicted RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 RAB20Q9NX57 234 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 CASC4Q6P4E1 433 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 CCDC13Q8IYE1 715 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 IQSEC3Q9UPP2 1182 aaPredicted RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 DNM2P50570 870 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 COG7P83436 770 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 TRIM42Q8IWZ5 723 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 KLHL7Q8IXQ5 586 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 JDP2Q8WYK2 163 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 JARID2Q92833 1246 aaPredicted RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 ARHGAP4P98171 946 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 MRFAP1L1Q96HT8 127 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 NOP56O00567 594 aaKnown RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 CHMP2AO43633 222 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 AKNAD1Q5T1N1 836 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 MIER3Q7Z3K6 550 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 SPZ1Q9BXG8 430 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 TRPC6Q9Y210 931 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 RIPOR2Q9Y4F9 1068 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 ATP8B1O43520 1251 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 XRCC5P13010 732 aaKnown RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 LMNB2Q03252 620 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 RAD51AP2Q09MP3 1159 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 KRT81Q14533 505 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 PLCB4Q15147 1175 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 KSR1Q8IVT5 923 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 CNOT10Q9H9A5 744 aaKnown RBP8.78□□□□□ -1
LIMD1-201ENST00000273317 SNX14Q9Y5W7 946 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 ZMYM6O95789 1325 aa8.78□□□□□ -1
LIMD1-201ENST00000273317 KRIT1O00522 736 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 GPAA1O43292 621 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 EXOC3O60645 756 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 LONRF2Q1L5Z9 754 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 ZC3H12CQ9C0D7 883 aaKnown RBP8.77□□□□□ -1
LIMD1-201ENST00000273317 LRWD1Q9UFC0 647 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 RNMTO43148 476 aaKnown RBP8.77□□□□□ -1
LIMD1-201ENST00000273317 PRR16Q569H4 304 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 SLFN12Q8IYM2 578 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 SNX29Q8TEQ0 813 aa8.77□□□□□ -1
LIMD1-201ENST00000273317 B4E1Z4 1266 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 GCNT3O95395 438 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 HSPA8P11142 646 aaKnown RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 ARMC9Q7Z3E5 817 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM31Q9BZY9 425 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 IPO11Q9UI26 975 aaKnown RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 THAP12O43422 761 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 MYCT1Q8N699 235 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 OR8K1Q8NGG5 319 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 RILPQ96NA2 401 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 CSRNP1Q96S65 589 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 SLF1Q9BQI6 1058 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 TXNDC9O14530 226 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 RASEFQ8IZ41 740 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 CNBD1Q8NA66 436 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 RABGGTAQ92696 567 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 CUEDC2Q9H467 287 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 ORC6Q9Y5N6 252 aa8.77□□□□□ -1.01
LIMD1-201ENST00000273317 HERC4Q5GLZ8 1057 aaPredicted RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 TRIM6Q9C030 488 aaPredicted RBP8.77□□□□□ -1.01
LIMD1-201ENST00000273317 LMBRD1Q9NUN5 540 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms