RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 KRT40Q6A162 431 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 KBTBD3Q8NAB2 608 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 VPS16Q9H269 839 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 MED4Q9NPJ6 270 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 RGS17Q9UGC6 210 aaPredicted RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 FAM169AQ9Y6X4 670 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 SETD1AO15047 1707 aaKnown RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 SRGAP2O75044 1071 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 SLC5A1P13866 664 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 TCP10Q12799 353 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 SMYD4Q8IYR2 804 aaPredicted RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 TDO2P48775 406 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 CCDC70Q6NSX1 233 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 GBP6Q6ZN66 633 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 DZIP1Q86YF9 867 aaKnown RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 TMEM139Q8IV31 216 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 KIAA0825Q8IV33 1275 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 PROM2Q8N271 834 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 MAGEB6Q8N7X4 407 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
CNGA3-201ENST00000272602 ZKSCAN3Q9BRR0 538 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 HDAC6Q9UBN7 1215 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 MYO6Q9UM54 1294 aa12.2□□□□□ -0.46
CNGA3-201ENST00000272602 RAD17O75943 681 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 ABL1P00519 1130 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
CNGA3-201ENST00000272602 CASP1P29466 404 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
CNGA3-201ENST00000272602 GNGT1P63211 74 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 GTF2IP78347 998 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 SCARF1Q14162 830 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 POSTNQ15063 836 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 KIAA1328Q86T90 577 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 AIDAQ96BJ3 306 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 SAP30BPQ9UHR5 308 aaKnown RBP12.19□□□□□ -0.46
CNGA3-201ENST00000272602 ZNF609O15014 1411 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 NDUFAB1O14561 156 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
CNGA3-201ENST00000272602 CDC25AP30304 524 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 GGCXP38435 758 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 CACNB3P54284 484 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 OTUD6BQ8N6M0 293 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 SLC26A6Q9BXS9 759 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 MAN1B1Q9UKM7 699 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 H0YIN7 160 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 DNA2P51530 1060 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 CEP57Q86XR8 500 aa12.19□□□□□ -0.46
CNGA3-201ENST00000272602 NOC3LQ8WTT2 800 aaKnown RBP12.19□□□□□ -0.46
CNGA3-201ENST00000272602 BCL9LQ86UU0 1499 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 ZNF213O14771 459 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 CYP7A1P22680 504 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 POLD1P28340 1107 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 IL15P40933 162 aaPredicted RBP12.18□□□□□ -0.46
CNGA3-201ENST00000272602 IARSP41252 1262 aaKnown RBP12.18□□□□□ -0.46
CNGA3-201ENST00000272602 ATP1A2P50993 1020 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
CNGA3-201ENST00000272602 INCENPQ9NQS7 918 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 MAPK8IP1Q9UQF2 711 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 GOLGA6BA6NDN3 693 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 ATP2C2O75185 946 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 ARHGAP27Q6ZUM4 889 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNGA3-201ENST00000272602 PSMB7Q99436 277 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 TRIM10Q9UDY6 481 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 NARFQ9UHQ1 456 aa12.18□□□□□ -0.46
CNGA3-201ENST00000272602 PCCAP05165 728 aaPredicted RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 NUP133Q8WUM0 1156 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 TUBE1Q9UJT0 475 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 TFR2Q9UP52 801 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 KRT9P35527 623 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 EXOSC10Q01780 885 aaKnown RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 NCOA7Q8NI08 942 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 HNRNPLLQ8WVV9 542 aaKnown RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 NFAT5O94916 1531 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 PHLPP1O60346 1717 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 HNRNPH1P31943 449 aaKnown RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 KCTD16Q68DU8 428 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 GNL3LQ9NVN8 582 aaKnown RBP12.17□□□□□ -0.46
CNGA3-201ENST00000272602 KCNJ14Q9UNX9 436 aa12.17□□□□□ -0.46
CNGA3-201ENST00000272602 CCDC172P0C7W6 258 aa12.16□□□□□ -0.46
CNGA3-201ENST00000272602 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
CNGA3-201ENST00000272602 GPR162Q16538 588 aa12.16□□□□□ -0.46
CNGA3-201ENST00000272602 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms