RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ARMC2Q8NEN0 867 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 EAF2Q96CJ1 260 aaPredicted RBP9.87□□□□□ -0.83
VAPB-201ENST00000265619 FSD1Q9BTV5 496 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 ZCWPW1Q9H0M4 648 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
VAPB-201ENST00000265619 CASP14P31944 242 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 C2orf54Q08AI8 447 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 PSMD2Q13200 908 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 WHAMMP3Q1A5X7 153 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 CCNI2Q6ZMN8 369 aaPredicted RBP9.87□□□□□ -0.83
VAPB-201ENST00000265619 SND1Q7KZF4 910 aaKnown RBP eCLIP9.87□□□□□ -0.83
VAPB-201ENST00000265619 CCDC148Q8NFR7 591 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 ZNF473Q8WTR7 871 aaKnown RBP9.87□□□□□ -0.83
VAPB-201ENST00000265619 PIGBQ92521 554 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 ITFG2Q969R8 447 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 SLC39A2Q9NP94 309 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 CARMIL3Q8ND23 1372 aa9.87□□□□□ -0.83
VAPB-201ENST00000265619 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
VAPB-201ENST00000265619 AKR1B15C9JRZ8 316 aaPredicted RBP9.86□□□□□ -0.83
VAPB-201ENST00000265619 ATP2C2O75185 946 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 KRT14P02533 472 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 NR1I3Q14994 352 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 SNCBQ16143 134 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 BEND3Q5T5X7 828 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 APTXQ7Z2E3 356 aaKnown RBP9.86□□□□□ -0.83
VAPB-201ENST00000265619 SLF1Q9BQI6 1058 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 SLIT3O75094 1523 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 TRPM3Q9HCF6 1732 aaPredicted RBP9.86□□□□□ -0.83
VAPB-201ENST00000265619 PPARAQ07869 468 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 TBC1D25Q3MII6 688 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 SLC9C2Q5TAH2 1124 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 STAMBPL1Q96FJ0 436 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 SUCLG2Q96I99 432 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 OSBPL7Q9BZF2 842 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 REXO2Q9Y3B8 237 aaKnown RBP9.86□□□□□ -0.83
VAPB-201ENST00000265619 PYGLP06737 847 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 SYKP43405 635 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 SLC7A5Q01650 507 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 DMGDHQ9UI17 866 aaKnown RBP9.86□□□□□ -0.83
VAPB-201ENST00000265619 GUCA1BQ9UMX6 200 aa9.86□□□□□ -0.83
VAPB-201ENST00000265619 MAP3K13O43283 966 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 ALDH1L1O75891 902 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 LSP1P33241 339 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 BICDL1Q6ZP65 573 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 TRAPPC11Q7Z392 1133 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 CLASRPQ8N2M8 674 aaKnown RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 C3orf20Q8ND61 904 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 AIFM3Q96NN9 605 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 SMARCAL1Q9NZC9 954 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 KCNQ2O43526 872 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 GBP2P32456 591 aaPredicted RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 SF3A3Q12874 501 aaKnown RBP eCLIP9.85□□□□□ -0.83
VAPB-201ENST00000265619 NBPF9Q3BBW0 867 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 AENQ8WTP8 325 aaKnown RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 G3BP2Q9UN86 482 aaKnown RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 USP54Q70EL1 1684 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 SASH1O94885 1247 aa9.85□□□□□ -0.83
VAPB-201ENST00000265619 ZKSCAN8Q15776 578 aaPredicted RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 SPATS2LQ9NUQ6 558 aaKnown RBP9.85□□□□□ -0.83
VAPB-201ENST00000265619 GRM8O00222 908 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 GYPCP04921 128 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 CMA1P23946 247 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 RAB27AP51159 221 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 RPS6KA3P51812 740 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 GRIN1Q05586 938 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 QPCTQ16769 361 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 RASSF8Q8NHQ8 419 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 CCT8L2Q96SF2 557 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 CHP1Q99653 195 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 SH3GL3Q99963 347 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 NUP58Q9BVL2 599 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 SNRKQ9NRH2 765 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 L3MBTL1Q9Y468 752 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 JCADQ9P266 1359 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 A0A1B0GUA9 196 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 STX17P56962 302 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 SKOR1P84550 965 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 G3BP1Q13283 466 aaKnown RBP eCLIP9.84□□□□□ -0.838e-6■■□□□ 11.5
VAPB-201ENST00000265619 C6orf89Q6UWU4 347 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 B4GALNT4Q76KP1 1039 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 CCDC114Q96M63 670 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 NEUROD6Q96NK8 337 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 PANX2Q96RD6 677 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 ATP6V0A4Q9HBG4 840 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 CPSF2Q9P2I0 782 aaKnown RBP9.84□□□□□ -0.83
VAPB-201ENST00000265619 MAN1B1Q9UKM7 699 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 HPSEQ9Y251 543 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 A0A1B0GVG6 124 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 NBPF26B4DH59 902 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 PDIA3P30101 505 aaKnown RBP9.84□□□□□ -0.83
VAPB-201ENST00000265619 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 USPL1Q5W0Q7 1092 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 SYNE4Q8N205 404 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 NBPF15Q8N660 670 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 MYCBPAPQ8TBZ2 947 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 NSMCE1Q8WV22 266 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 YIPF3Q9GZM5 350 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms