RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 SPATA20Q8TB22 786 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 EPSTI1Q96J88 318 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 CCNL1Q9UK58 526 aaPredicted RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 NT5C2P49902 561 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 PLCD1P51178 756 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 FMR1Q06787 632 aaKnown RBP eCLIP11.74□□□□□ -0.531e-6■■□□□ 13.4
LSG1-201ENST00000265245 ZNF174Q15697 407 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
LSG1-201ENST00000265245 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
LSG1-201ENST00000265245 TMEM232C9JQI7 657 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 CYP2D6P10635 497 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 ZNF18P17022 549 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 AFMP43652 599 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 TRAPPC10P48553 1259 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 AMOTL1Q8IY63 956 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 TRMT44Q8IYL2 757 aaKnown RBP11.73□□□□□ -0.53
LSG1-201ENST00000265245 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 ANKIB1Q9P2G1 1089 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 ZNF215Q9UL58 517 aaPredicted RBP11.73□□□□□ -0.53
LSG1-201ENST00000265245 JAG2Q9Y219 1238 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
LSG1-201ENST00000265245 ERO1AQ96HE7 468 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 VWA3AA6NCI4 1184 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 SLU7O95391 586 aaKnown RBP11.73□□□□□ -0.53
LSG1-201ENST00000265245 USP5P45974 858 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 SPECC1LQ69YQ0 1117 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
LSG1-201ENST00000265245 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 LDHBP07195 334 aaKnown RBP11.72□□□□□ -0.53
LSG1-201ENST00000265245 CALML3P27482 149 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 ATP2C1P98194 919 aaPredicted RBP11.72□□□□□ -0.53
LSG1-201ENST00000265245 EVX2Q03828 476 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 PTGDRQ13258 359 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 NPY5RQ15761 445 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
LSG1-201ENST00000265245 SYT10Q6XYQ8 523 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 PTF1AQ7RTS3 328 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 TXNRD3Q86VQ6 643 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 GSDMAQ96QA5 445 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 PYM1Q9BRP8 204 aaKnown RBP11.72□□□□□ -0.53
LSG1-201ENST00000265245 TMX1Q9H3N1 280 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 LY75O60449 1722 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 ZSCAN12O43309 604 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 AFF2P51816 1311 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
LSG1-201ENST00000265245 DGKHQ86XP1 1220 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
LSG1-201ENST00000265245 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
LSG1-201ENST00000265245 A0A087X0B3 334 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 BAG3O95817 575 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 RFC4P35249 363 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 GSTO1P78417 241 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 TFAP4Q01664 338 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 KLHL10Q6JEL2 608 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 MKNK2Q9HBH9 465 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 LEMD3Q9Y2U8 911 aa11.71□□□□□ -0.53
LSG1-201ENST00000265245 TM4SF1P30408 202 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 NAA30Q147X3 362 aaPredicted RBP11.71□□□□□ -0.54
LSG1-201ENST00000265245 SLC4A8Q2Y0W8 1093 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 BAG1Q99933 345 aaPredicted RBP11.71□□□□□ -0.54
LSG1-201ENST00000265245 SAMSN1Q9NSI8 373 aaKnown RBP11.71□□□□□ -0.54
LSG1-201ENST00000265245 RGS17Q9UGC6 210 aaPredicted RBP11.71□□□□□ -0.54
LSG1-201ENST00000265245 SYNRGQ9UMZ2 1314 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 WNT7AO00755 349 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 GNAQP50148 359 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 PTPN21Q16825 1174 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.54
LSG1-201ENST00000265245 C12orf60Q5U649 245 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 SPATA1Q5VX52 437 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 PNMA1Q8ND90 353 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 FEZ1Q99689 392 aa11.71□□□□□ -0.54
LSG1-201ENST00000265245 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
LSG1-201ENST00000265245 TAF1P21675 1872 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 MYH2Q9UKX2 1941 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 MCM7P33993 719 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 SMAP1Q8IYB5 467 aaPredicted RBP11.7□□□□□ -0.54
LSG1-201ENST00000265245 L2HGDHQ9H9P8 463 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 TNS1Q9HBL0 1735 aaKnown RBP11.7□□□□□ -0.54
LSG1-201ENST00000265245 GOLGA6L9A6NEM1 432 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 STX10O60499 249 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 TXLNAP40222 546 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 GOLGA8FQ08AF8 430 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 GOLGA8DPQ0D2H9 430 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 DPYDQ12882 1025 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 TBX2Q13207 712 aaPredicted RBP11.7□□□□□ -0.54
LSG1-201ENST00000265245 GRAPQ13588 217 aa11.7□□□□□ -0.54
LSG1-201ENST00000265245 GRAPLQ8TC17 118 aaPredicted RBP11.7□□□□□ -0.54
LSG1-201ENST00000265245 DNAI1Q9UI46 699 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms