RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PUS3Q9BZE2 481 aaKnown RBP18.19■□□□□ 0.5
GPC1-201ENST00000264039 KCND1Q9NSA2 647 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 DUSP10Q9Y6W6 482 aa18.19■□□□□ 0.5
GPC1-201ENST00000264039 SYF2O95926 243 aaKnown RBP18.18■□□□□ 0.5
GPC1-201ENST00000264039 GYPCP04921 128 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
GPC1-201ENST00000264039 TSGA10IPQ3SY00 556 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 IFIH1Q9BYX4 1025 aaKnown RBP18.18■□□□□ 0.5
GPC1-201ENST00000264039 MED23Q9ULK4 1368 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 MEFVO15553 781 aaPredicted RBP18.18■□□□□ 0.5
GPC1-201ENST00000264039 MYBL2P10244 700 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 BMP6P22004 513 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 NR1I3Q14994 352 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
GPC1-201ENST00000264039 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 UBA7P41226 1012 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 FMNL3Q8IVF7 1028 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 CPSF2Q9P2I0 782 aaKnown RBP18.18■□□□□ 0.5
GPC1-201ENST00000264039 LRWD1Q9UFC0 647 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 STK38LQ9Y2H1 464 aa18.18■□□□□ 0.5
GPC1-201ENST00000264039 ENO4A6NNW6 628 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 MOCS3O95396 460 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 TMEM139Q8IV31 216 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 PROCA1Q8NCQ7 364 aaPredicted RBP18.17■□□□□ 0.5
GPC1-201ENST00000264039 UHMK1Q8TAS1 419 aaKnown RBP18.17■□□□□ 0.5
GPC1-201ENST00000264039 IL17RAQ96F46 866 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 DMGDHQ9UI17 866 aaKnown RBP18.17■□□□□ 0.5
GPC1-201ENST00000264039 RAB21Q9UL25 225 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 TRIM49BA6NDI0 452 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 B4DLN1 442 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 NR1D1P20393 614 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.17■□□□□ 0.5
GPC1-201ENST00000264039 HDAC7Q8WUI4 952 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 SENP2Q9HC62 589 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
GPC1-201ENST00000264039 TTC26A0AVF1 554 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 NCK2O43639 380 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 VIMP08670 466 aaKnown RBP18.16■□□□□ 0.5
GPC1-201ENST00000264039 GPTP24298 496 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 ADORA1P30542 326 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 ERVK-24P63145 666 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 MIGA1Q8NAN2 632 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 TRIM68Q6AZZ1 485 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 RASGRP2Q7LDG7 609 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 SUGP1Q8IWZ8 645 aaKnown RBP18.16■□□□□ 0.5
GPC1-201ENST00000264039 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 TET3O43151 1660 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 PSMA7O14818 248 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
GPC1-201ENST00000264039 MAGEA1P43355 309 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 LDHAL6AQ6ZMR3 332 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 CSGALNACT2Q8N6G5 542 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 ALDH8A1Q9H2A2 487 aaPredicted RBP18.16■□□□□ 0.5
GPC1-201ENST00000264039 GDAQ9Y2T3 454 aa18.16■□□□□ 0.5
GPC1-201ENST00000264039 V9GY48 417 aaPredicted RBP18.16■□□□□ 0.5
GPC1-201ENST00000264039 CDC25CP30307 473 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 IL15P40933 162 aaPredicted RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 MYO1EQ12965 1108 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 CCNI2Q6ZMN8 369 aaPredicted RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 CCDC51Q96ER9 411 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 HAUS2Q9NVX0 235 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 USP42Q9H9J4 1324 aaKnown RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 PDHBP11177 359 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 ERCC5P28715 1186 aaPredicted RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 NFRKBQ6P4R8 1299 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 IFT20Q8IY31 132 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 TEX11Q8IYF3 940 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 NOC4LQ9BVI4 516 aaKnown RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 NACAP1Q9BZK3 213 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 MLXIPQ9HAP2 919 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 CAMSAP1Q5T5Y3 1602 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 HEXIM1O94992 359 aaKnown RBP18.15■□□□□ 0.5
GPC1-201ENST00000264039 KRT12Q99456 494 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 NLRC4Q9NPP4 1024 aa18.15■□□□□ 0.5
GPC1-201ENST00000264039 GUCY1A2P33402 732 aa18.14■□□□□ 0.5
GPC1-201ENST00000264039 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.5
GPC1-201ENST00000264039 AMOTL1Q8IY63 956 aa18.14■□□□□ 0.5
GPC1-201ENST00000264039 ARFGAP2Q8N6H7 521 aa18.14■□□□□ 0.5
GPC1-201ENST00000264039 OXER1Q8TDS5 423 aa18.14■□□□□ 0.5
GPC1-201ENST00000264039 METTL22Q9BUU2 404 aaPredicted RBP18.14■□□□□ 0.5
GPC1-201ENST00000264039 HSD3B7Q9H2F3 369 aa18.14■□□□□ 0.5
GPC1-201ENST00000264039 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
GPC1-201ENST00000264039 ARHGEF10O15013 1369 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 A0A1B0GTH6 734 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 GCOM1H8Y6P7 765 aaPredicted RBP18.14■□□□□ 0.49
GPC1-201ENST00000264039 MYZAPP0CAP1 466 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 MYBL1P10243 752 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 CABP4P57796 275 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 KRT71Q3SY84 523 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 CACNA2D3Q8IZS8 1091 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 SPDL1Q96EA4 605 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 LRP2BPQ9P2M1 347 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 FAM205CA6NFA0 338 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 XAGE2Q96GT9 111 aa18.14■□□□□ 0.49
GPC1-201ENST00000264039 KAZALD1Q96I82 304 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms