RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 PHLDB3Q6NSJ2 640 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 NR1H4Q96RI1 486 aaPredicted RBP12.52□□□□□ -0.41
PTPN4-201ENST00000263708 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■□□ 16.2
PTPN4-201ENST00000263708 ADCY8P40145 1251 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 MYL5Q02045 173 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 GANCQ8TET4 914 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 RAB17Q9H0T7 212 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 RNF40O75150 1001 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 KRT71Q3SY84 523 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 NUCB1Q02818 461 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 RPS6KA1Q15418 735 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 CCDC124Q96CT7 223 aaKnown RBP12.52□□□□□ -0.41
PTPN4-201ENST00000263708 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 PA2G4Q9UQ80 394 aaKnown RBP12.52□□□□□ -0.41
PTPN4-201ENST00000263708 PAK2Q13177 524 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 NSMFQ6X4W1 530 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
PTPN4-201ENST00000263708 OTUD6AQ7L8S5 288 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CDC26Q8NHZ8 85 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 MICAL1Q8TDZ2 1067 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 SZRD1Q7Z422 152 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 MAD1L1Q9Y6D9 718 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 MBD4O95243 580 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 SLC9A5Q14940 896 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 PDZD4Q76G19 769 aaPredicted RBP12.51□□□□□ -0.41
PTPN4-201ENST00000263708 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CFBP00751 764 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 DEPTORQ8TB45 409 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 TTF2Q9UNY4 1162 aaKnown RBP12.51□□□□□ -0.41
PTPN4-201ENST00000263708 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CNBD1Q8NA66 436 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 HELLSQ9NRZ9 838 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 OGFRQ9NZT2 677 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CYP2J2P51589 502 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 TFCP2Q12800 502 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 TEKT1Q969V4 418 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 FAM95CA0A1B0GW59 222 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
PTPN4-201ENST00000263708 BLVRAP53004 296 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 KLHL30Q0D2K2 578 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
PTPN4-201ENST00000263708 SLC1A4P43007 532 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 NLRP7Q8WX94 980 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 THAP12O43422 761 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 MAIP1Q8WWC4 291 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 ABCB4P21439 1286 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 SNX29Q8TEQ0 813 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 PTPROQ16827 1216 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 FIS1Q9Y3D6 152 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 TRIM4Q9C037 500 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 AATFQ9NY61 560 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN4-201ENST00000263708 ADCY7P51828 1080 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 EIF2AQ9BY44 585 aaKnown RBP12.5□□□□□ -0.41
PTPN4-201ENST00000263708 NEUROG2Q9H2A3 272 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 TNNC2P02585 160 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 EEF1B2P24534 225 aaKnown RBP12.5□□□□□ -0.41
PTPN4-201ENST00000263708 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 DENND2AQ9ULE3 1009 aa12.5□□□□□ -0.41
PTPN4-201ENST00000263708 GCKP35557 465 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 PFDN1O60925 122 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 AMFRQ9UKV5 643 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
PTPN4-201ENST00000263708 B4E1Z4 1266 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 CCDC138Q96M89 665 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 LSM14BQ9BX40 385 aaKnown RBP12.49□□□□□ -0.41
PTPN4-201ENST00000263708 A6NJR5 290 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 NELFBQ8WX92 580 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
PTPN4-201ENST00000263708 PUM3Q15397 648 aaKnown RBP12.49□□□□□ -0.41
PTPN4-201ENST00000263708 APOL6Q9BWW8 343 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 PRKAG2Q9UGJ0 569 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 AK2P54819 239 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 RCN2Q14257 317 aa12.49□□□□□ -0.41
PTPN4-201ENST00000263708 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms