RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 H7C1D1 291 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 DKC1O60832 514 aaKnown RBP eCLIP11.94□□□□□ -0.5
CD44-201ENST00000263398 NDUFA8P51970 172 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 FAM47AQ5JRC9 791 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 DPH6Q7L8W6 267 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 SYCE1Q8N0S2 351 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 PPP2R2CQ9Y2T4 447 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 TNKSO95271 1327 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 LACTBP83111 547 aaPredicted RBP11.94□□□□□ -0.5
CD44-201ENST00000263398 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 TRIM58Q8NG06 486 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 ZSCAN10Q96SZ4 725 aaPredicted RBP11.94□□□□□ -0.5
CD44-201ENST00000263398 HAUS4Q9H6D7 363 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 CTTNBP2NLQ9P2B4 639 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 SYNMO15061 1565 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 EFCAB8A8MWE9 144 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 KCNJ18B7U540 433 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 CYP21A2P08686 494 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 INPP5BP32019 993 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 KCNJ12Q14500 433 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 CLUL1Q15846 466 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 SPATA1Q5VX52 437 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 INTS8Q75QN2 995 aaKnown RBP11.94□□□□□ -0.5
CD44-201ENST00000263398 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 C2CD5Q86YS7 1000 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 NELFCDQ8IXH7 590 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 IFT74Q96LB3 600 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 MLH3Q9UHC1 1453 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 EXOC3O60645 756 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 PEX26Q7Z412 305 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 DAAM2Q86T65 1068 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 KLHL7Q8IXQ5 586 aa11.94□□□□□ -0.5
CD44-201ENST00000263398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.5
CD44-201ENST00000263398 GNA14O95837 355 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 SLC39A14Q15043 492 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 SPATA24Q86W54 205 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 DESI2Q9BSY9 194 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 TRIM31Q9BZY9 425 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 PCDHA5Q9Y5H7 936 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 ERCC3P19447 782 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 LIN9Q5TKA1 542 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
CD44-201ENST00000263398 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
CD44-201ENST00000263398 BCRP11274 1271 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 MORC3Q14149 939 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
CD44-201ENST00000263398 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 MTMR3Q13615 1198 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 SIRT2Q8IXJ6 389 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 TRIM7Q9C029 511 aa11.93□□□□□ -0.5
CD44-201ENST00000263398 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 PABPN1LA6NDY0 278 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 SCG2P13521 617 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 GBP6Q6ZN66 633 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 MYCT1Q8N699 235 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 CABS1Q96KC9 395 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 FAM169AQ9Y6X4 670 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 PDE8BO95263 885 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 PCP11498 1178 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 MAK16Q9BXY0 300 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 ASIC3Q9UHC3 531 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 CLIC4Q9Y696 253 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 CLTCL1P53675 1640 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 GCNT3O95395 438 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 ARHGAP25P42331 645 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 RAD51AP2Q09MP3 1159 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 CCDC14Q49A88 953 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 MYOCDQ8IZQ8 938 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 NSUN7Q8NE18 718 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 MRPL44Q9H9J2 332 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 DDX41Q9UJV9 622 aaKnown RBP11.92□□□□□ -0.5
CD44-201ENST00000263398 RCOR1Q9UKL0 485 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 PYCARDQ9ULZ3 195 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 SSX2IPQ9Y2D8 614 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
CD44-201ENST00000263398 KDM3AQ9Y4C1 1321 aa11.91□□□□□ -0.5
CD44-201ENST00000263398 CIAO1O76071 339 aa11.91□□□□□ -0.5
CD44-201ENST00000263398 ATP7BP35670 1465 aa11.91□□□□□ -0.5
CD44-201ENST00000263398 HARSP12081 509 aaKnown RBP11.91□□□□□ -0.5
CD44-201ENST00000263398 PROSER3Q2NL68 480 aa11.91□□□□□ -0.5
CD44-201ENST00000263398 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
CD44-201ENST00000263398 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
CD44-201ENST00000263398 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms