RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 HOOK1Q9UJC3 728 aaKnown RBP18.78■□□□□ 0.6
ZNF541-201ENST00000263351 ENC1O14682 589 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.6
ZNF541-201ENST00000263351 CYP2D6P10635 497 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 KRT31Q15323 416 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 SPATA1Q5VX52 437 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 CCDC24Q8N4L8 307 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 GOLGA1Q92805 767 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 PDE11AQ9HCR9 933 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 HDAC6Q9UBN7 1215 aa18.77■□□□□ 0.6
ZNF541-201ENST00000263351 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 CDKAL1Q5VV42 579 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 GDAP1L1Q96MZ0 367 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 PHF20Q9BVI0 1012 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 NACAP1Q9BZK3 213 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 TMEM51Q9NW97 253 aa18.77■□□□□ 0.59
ZNF541-201ENST00000263351 RRAGBQ5VZM2 374 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 COL1A1P02452 1464 aaPredicted RBP18.76■□□□□ 0.59
ZNF541-201ENST00000263351 MROH5Q6ZUA9 1318 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 KRT2P35908 639 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 TXLNAP40222 546 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 AKAP17AQ02040 695 aaKnown RBP18.76■□□□□ 0.59
ZNF541-201ENST00000263351 RASGRP2Q7LDG7 609 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 SH3RF1Q7Z6J0 888 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 SRBD1Q8N5C6 995 aaKnown RBP18.76■□□□□ 0.59
ZNF541-201ENST00000263351 RGS22Q8NE09 1264 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 ABCB6Q9NP58 842 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 LCMT1Q9UIC8 334 aa18.76■□□□□ 0.59
ZNF541-201ENST00000263351 PMS1P54277 932 aaKnown RBP18.75■□□□□ 0.59
ZNF541-201ENST00000263351 VSNL1P62760 191 aa18.75■□□□□ 0.59
ZNF541-201ENST00000263351 GPKOWQ92917 476 aaPredicted RBP eCLIP18.75■□□□□ 0.59
ZNF541-201ENST00000263351 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
ZNF541-201ENST00000263351 SRGAP2O75044 1071 aa18.75■□□□□ 0.59
ZNF541-201ENST00000263351 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
ZNF541-201ENST00000263351 ZNF579Q8NAF0 562 aaKnown RBP18.75■□□□□ 0.59
ZNF541-201ENST00000263351 ZSCAN10Q96SZ4 725 aaPredicted RBP18.75■□□□□ 0.59
ZNF541-201ENST00000263351 CCDC66A2RUB6 948 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 PES1O00541 588 aaKnown RBP18.74■□□□□ 0.59
ZNF541-201ENST00000263351 N4BP3O15049 544 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 TUBB4AP04350 444 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 LMAN1P49257 510 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 RABGGTAQ92696 567 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 DACH1Q9UI36 760 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 MAGEB6P1A0A0J9YX57 407 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 ZMYND10O75800 440 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 ERCC5P28715 1186 aaPredicted RBP18.74■□□□□ 0.59
ZNF541-201ENST00000263351 FOXR1Q6PIV2 292 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 SRGAP1Q7Z6B7 1085 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 NUP88Q99567 741 aaPredicted RBP18.74■□□□□ 0.59
ZNF541-201ENST00000263351 ITGB4P16144 1822 aa18.74■□□□□ 0.59
ZNF541-201ENST00000263351 ARHGAP25P42331 645 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 TROAPQ12815 778 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 PANX2Q96RD6 677 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 FAM205AQ6ZU69 1335 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 USP17L12C9JPN9 530 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 USP17L21D6R901 530 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 TNFRSF25Q93038 417 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 RIOK1Q9BRS2 568 aaKnown RBP18.73■□□□□ 0.59
ZNF541-201ENST00000263351 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 VPS18Q9P253 973 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 ADAM21Q9UKJ8 722 aa18.73■□□□□ 0.59
ZNF541-201ENST00000263351 REXO2Q9Y3B8 237 aaKnown RBP18.73■□□□□ 0.59
ZNF541-201ENST00000263351 CICQ96RK0 1608 aaPredicted RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 KIF5CO60282 957 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 KLK7P49862 253 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 BEND6Q5SZJ8 279 aaPredicted RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 TRIML1Q8N9V2 468 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 LRRC15Q8TF66 581 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 ESR2Q92731 530 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 RNF26Q9BY78 433 aaPredicted RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 CDC23Q9UJX2 597 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 GUCA1BQ9UMX6 200 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 PNPLA7Q6ZV29 1317 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 PLEKHG2Q9H7P9 1386 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 MRPS25P82663 173 aaKnown RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 RAD51AP2Q09MP3 1159 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 DHX8Q14562 1220 aaKnown RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 E2F4Q16254 413 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 GSPT2Q8IYD1 628 aaKnown RBP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 CPVLQ9H3G5 476 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 ABHD10Q9NUJ1 306 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
ZNF541-201ENST00000263351 NIP7Q9Y221 180 aaKnown RBP eCLIP18.72■□□□□ 0.59
ZNF541-201ENST00000263351 MYH13Q9UKX3 1938 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 ERCC3P19447 782 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 BICDL1Q6ZP65 573 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 CEP131Q9UPN4 1083 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 DOCK2Q92608 1830 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 CCDC196A0A1B0GTZ2 297 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 GOLGA6L9A6NEM1 432 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 ANKRD65E5RJM6 399 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 PRCPP42785 496 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 PDXDC2PQ6P474 469 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
ZNF541-201ENST00000263351 NID2Q14112 1375 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms