RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
TIMP2-201ENST00000262768 NTRK3Q16288 839 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 KCNQ5Q9NR82 932 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
TIMP2-201ENST00000262768 CNTNAP4Q9C0A0 1308 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 A0A1W2PQ27 194 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 A0A1W2PQ64 194 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 A0A1W2PQD8 194 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 CBFA2T2O43439 604 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 C21orf2O43822 256 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 PLCG2P16885 1265 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
TIMP2-201ENST00000262768 MAGEC2Q9UBF1 373 aaPredicted RBP17.16■□□□□ 0.34
TIMP2-201ENST00000262768 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 CALML3P27482 149 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 TMTC3Q6ZXV5 915 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
TIMP2-201ENST00000262768 EP400Q96L91 3159 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 BBOX1O75936 387 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 CAVIN2O95810 425 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 GNAQP50148 359 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 PKD2L1Q9P0L9 805 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 CEP135Q66GS9 1140 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
TIMP2-201ENST00000262768 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 TRIM47Q96LD4 638 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 SAMSN1Q9NSI8 373 aaKnown RBP17.15■□□□□ 0.34
TIMP2-201ENST00000262768 DNAI1Q9UI46 699 aa17.15■□□□□ 0.34
TIMP2-201ENST00000262768 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
TIMP2-201ENST00000262768 TEKT1Q969V4 418 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 TBC1D7Q9P0N9 293 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 SEMA3EO15041 775 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 FUCA2Q9BTY2 467 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
TIMP2-201ENST00000262768 POLD4Q9HCU8 107 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 AXDND1Q5T1B0 1012 aaPredicted RBP17.14■□□□□ 0.33
TIMP2-201ENST00000262768 SYT10Q6XYQ8 523 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
TIMP2-201ENST00000262768 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
TIMP2-201ENST00000262768 SLC1A4P43007 532 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 NAP1L1P55209 391 aaKnown RBP17.13■□□□□ 0.33
TIMP2-201ENST00000262768 FEZ1Q99689 392 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 KCNF1Q9H3M0 494 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 DNA2P51530 1060 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 DDR1Q08345 913 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 TROAPQ12815 778 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 GJA10Q969M2 543 aa17.13■□□□□ 0.33
TIMP2-201ENST00000262768 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.13■□□□□ 0.33
TIMP2-201ENST00000262768 TMEM232C9JQI7 657 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 UBE2SQ16763 222 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
TIMP2-201ENST00000262768 STIM1Q13586 685 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 OGFOD1Q8N543 542 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 ENGASEQ8NFI3 743 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 AOC3Q16853 763 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 FNBP4Q8N3X1 1017 aaPredicted RBP17.12■□□□□ 0.33
TIMP2-201ENST00000262768 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
TIMP2-201ENST00000262768 PCDHAC2Q9Y5I4 1007 aa17.12■□□□□ 0.33
TIMP2-201ENST00000262768 MIGA2Q7L4E1 593 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
TIMP2-201ENST00000262768 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
TIMP2-201ENST00000262768 TMEM260Q9NX78 707 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 TAB2Q9NYJ8 693 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 SALL1Q9NSC2 1324 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
TIMP2-201ENST00000262768 PRKG1Q13976 671 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 LRRC8AQ8IWT6 810 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 DPF2Q92785 391 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 SERPINB13Q9UIV8 391 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
TIMP2-201ENST00000262768 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
TIMP2-201ENST00000262768 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
TIMP2-201ENST00000262768 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
TIMP2-201ENST00000262768 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 PPP6R2O75170 966 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 AKR1B1P15121 316 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 ALDH1B1P30837 517 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 IQCB1Q15051 598 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 CCDC12Q8WUD4 166 aaPredicted RBP17.1■□□□□ 0.33
TIMP2-201ENST00000262768 TCEAL9Q9UHQ7 104 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 DDAH1O94760 285 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
TIMP2-201ENST00000262768 MTIF2P46199 727 aaKnown RBP17.1■□□□□ 0.33
TIMP2-201ENST00000262768 GNG11P61952 73 aa17.1■□□□□ 0.33
TIMP2-201ENST00000262768 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms