RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 KRT85P78386 507 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 KRT40Q6A162 431 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 NYAP2Q9P242 653 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 CNPY2Q9Y2B0 182 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 TRAK2O60296 914 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
VAMP7-201ENST00000262640 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
VAMP7-201ENST00000262640 RASA3Q14644 834 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 CABP5Q9NP86 173 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 HACL1Q9UJ83 578 aa15.07■□□□□ 0
VAMP7-201ENST00000262640 V9GY48 417 aaPredicted RBP15.07■□□□□ 0
VAMP7-201ENST00000262640 UBE2Q2LH0YL09 131 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 XBP1P17861 261 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 BRAPQ7Z569 592 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 CLEC10AQ8IUN9 316 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 LRRC47Q8N1G4 583 aaKnown RBP15.06■□□□□ 0
VAMP7-201ENST00000262640 STAG2Q8N3U4 1231 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 GJB4Q9NTQ9 266 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 GDF11O95390 407 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 MAP3K10Q02779 954 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 PKN1Q16512 942 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 ATL3Q6DD88 541 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 MKL1Q969V6 931 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 MTMR7Q9Y216 660 aa15.06■□□□□ 0
VAMP7-201ENST00000262640 SNHG28P0DPA3 235 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 PDHBP11177 359 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 SMARCA1P28370 1054 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 KIF23Q02241 960 aaPredicted RBP15.05■□□□□ 0
VAMP7-201ENST00000262640 ICA1Q05084 483 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 SEPT2Q15019 361 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 ASPRV1Q53RT3 343 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 FAM173BQ6P4H8 233 aa15.05■□□□□ 0
VAMP7-201ENST00000262640 APOBEC3FQ8IUX4 373 aaKnown RBP15.05■□□□□ 0
VAMP7-201ENST00000262640 KLRF2D3W0D1 207 aa15.05■□□□□ -0
VAMP7-201ENST00000262640 ATP2B2Q01814 1243 aa15.05■□□□□ -0
VAMP7-201ENST00000262640 SAFBQ15424 915 aaKnown RBP eCLIP15.05■□□□□ -0
VAMP7-201ENST00000262640 USP48Q86UV5 1035 aa15.05■□□□□ -0
VAMP7-201ENST00000262640 SPZ1Q9BXG8 430 aa15.05■□□□□ -0
VAMP7-201ENST00000262640 SCAND2PQ9GZW5 306 aaPredicted RBP15.05■□□□□ -0
VAMP7-201ENST00000262640 USP17L5A8MUK1 530 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 FIBPO43427 364 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 GH2P01242 217 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 EEF2P13639 858 aaKnown RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 RRP1BQ14684 758 aaKnown RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 CDAN1Q8IWY9 1227 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 TRPM4Q8TD43 1214 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 TEPSINQ96N21 525 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 ZNF396Q96N95 335 aaPredicted RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 GDPD2Q9HCC8 539 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 ASTN2O75129 1339 aaPredicted RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 DDNO94850 711 aaPredicted RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 MMP1P03956 469 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 SCG2P13521 617 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 LMOD1P29536 600 aaPredicted RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 GPR162Q16538 588 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
VAMP7-201ENST00000262640 USP17L2Q6R6M4 530 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 CFAP45Q9UL16 551 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 SYNPO2Q9UMS6 1093 aa15.04■□□□□ -0
VAMP7-201ENST00000262640 GOLGA8HP0CJ92 632 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 EPS15P42566 896 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 GNL2Q13823 731 aaKnown RBP15.03■□□□□ -0
VAMP7-201ENST00000262640 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 DDX49Q9Y6V7 483 aaKnown RBP15.03■□□□□ -0
VAMP7-201ENST00000262640 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 GRIN3BO60391 1043 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 U2AF2P26368 475 aaKnown RBP eCLIP15.03■□□□□ -0
VAMP7-201ENST00000262640 JAG1P78504 1218 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 MIGA2Q7L4E1 593 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 RASGRP2Q7LDG7 609 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 ELP1O95163 1332 aa15.03■□□□□ -0
VAMP7-201ENST00000262640 KIF28PB7ZC32 967 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 MBD3O95983 291 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 ZNF543Q08ER8 600 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 GPATCH4Q5T3I0 446 aaKnown RBP15.02■□□□□ -0
VAMP7-201ENST00000262640 ANGEL2Q5VTE6 544 aaKnown RBP15.02■□□□□ -0
VAMP7-201ENST00000262640 SIAH1Q8IUQ4 282 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 DCAF4Q8WV16 495 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 HOOK2Q96ED9 719 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 ZBTB21Q9ULJ3 1066 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 KCNJ14Q9UNX9 436 aa15.02■□□□□ -0
VAMP7-201ENST00000262640 CYTH3O43739 400 aa15.02□□□□□ -0.01
VAMP7-201ENST00000262640 CAP2P40123 477 aa15.02□□□□□ -0.01
VAMP7-201ENST00000262640 SLC35G1Q2M3R5 365 aa15.02□□□□□ -0.01
VAMP7-201ENST00000262640 FOXP1Q9H334 677 aaPredicted RBP15.02□□□□□ -0.01
VAMP7-201ENST00000262640 SH3GLB2Q9NR46 395 aa15.02□□□□□ -0.01
VAMP7-201ENST00000262640 ADARB2Q9NS39 739 aaKnown RBP15.02□□□□□ -0.01
VAMP7-201ENST00000262640 VPS54Q9P1Q0 977 aa15.02□□□□□ -0.01
VAMP7-201ENST00000262640 TFIP11Q9UBB9 837 aaKnown RBP15.02□□□□□ -0.01
VAMP7-201ENST00000262640 PPP2R3BQ9Y5P8 575 aa15.02□□□□□ -0.01
VAMP7-201ENST00000262640 ZC3H4Q9UPT8 1303 aaKnown RBP15.02□□□□□ -0.01
VAMP7-201ENST00000262640 MYSM1Q5VVJ2 828 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 DPY19L2Q6NUT2 758 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 DIS3L2Q8IYB7 885 aaKnown RBP15.01□□□□□ -0.01
VAMP7-201ENST00000262640 FAM177A1Q8N128 213 aaPredicted RBP15.01□□□□□ -0.01
VAMP7-201ENST00000262640 GMCL1P1Q8NEA9 526 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 SPATA32Q96LK8 384 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms