RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 MTMR2Q13614 643 aa28.54■■■□□ 2.16
SCN1B-201ENST00000262631 ZYXQ15942 572 aaKnown RBP28.54■■■□□ 2.16
SCN1B-201ENST00000262631 KIAA1755Q5JYT7 1200 aa28.54■■■□□ 2.16
SCN1B-201ENST00000262631 ZNF654Q8IZM8 581 aa28.54■■■□□ 2.16
SCN1B-201ENST00000262631 AS3MTQ9HBK9 375 aa28.54■■■□□ 2.16
SCN1B-201ENST00000262631 SLC12A7Q9Y666 1083 aa28.54■■■□□ 2.16
SCN1B-201ENST00000262631 TLL2Q9Y6L7 1015 aa28.54■■■□□ 2.16
SCN1B-201ENST00000262631 PHIPQ8WWQ0 1821 aa28.53■■■□□ 2.16
SCN1B-201ENST00000262631 IRF6O14896 467 aa28.53■■■□□ 2.16
SCN1B-201ENST00000262631 LARGE1O95461 756 aa28.53■■■□□ 2.16
SCN1B-201ENST00000262631 PPATQ06203 517 aa28.53■■■□□ 2.16
SCN1B-201ENST00000262631 TROAPQ12815 778 aa28.53■■■□□ 2.16
SCN1B-201ENST00000262631 FEZ1Q99689 392 aa28.53■■■□□ 2.16
SCN1B-201ENST00000262631 NAP1L2Q9ULW6 460 aaPredicted RBP28.53■■■□□ 2.16
SCN1B-201ENST00000262631 RBM19Q9Y4C8 960 aaKnown RBP28.53■■■□□ 2.16
SCN1B-201ENST00000262631 USP17L10C9JJH3 530 aa28.52■■■□□ 2.16
SCN1B-201ENST00000262631 CATIPQ7Z7H3 387 aa28.52■■■□□ 2.16
SCN1B-201ENST00000262631 IL27Q8NEV9 243 aa28.52■■■□□ 2.16
SCN1B-201ENST00000262631 ABT1Q9ULW3 272 aaKnown RBP28.52■■■□□ 2.16
SCN1B-201ENST00000262631 F5H6K3 240 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 PDIA3P30101 505 aaKnown RBP28.51■■■□□ 2.16
SCN1B-201ENST00000262631 BACE1P56817 501 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 KLRC3Q07444 240 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 MICU3Q86XE3 530 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 KIAA1683Q9H0B3 1180 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 LIMCH1Q9UPQ0 1083 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 HPS5Q9UPZ3 1129 aa28.51■■■□□ 2.16
SCN1B-201ENST00000262631 GOLGA8BA8MQT2 603 aa28.51■■■□□ 2.15
SCN1B-201ENST00000262631 RAD21O60216 631 aa28.51■■■□□ 2.15
SCN1B-201ENST00000262631 ME3Q16798 604 aa28.51■■■□□ 2.15
SCN1B-201ENST00000262631 SPICE1Q8N0Z3 855 aa28.51■■■□□ 2.15
SCN1B-201ENST00000262631 NUP133Q8WUM0 1156 aa28.51■■■□□ 2.15
SCN1B-201ENST00000262631 MYH4Q9Y623 1939 aa28.51■■■□□ 2.15
SCN1B-201ENST00000262631 STK3Q13188 491 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 PPIL2Q13356 520 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 CCDC144CPQ8IYA2 1237 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 GMCL1P1Q8NEA9 526 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 SNX21Q969T3 373 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 TBC1D2Q9BYX2 928 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 SH2D4AQ9H788 454 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 SYNPO2Q9UMS6 1093 aa28.5■■■□□ 2.15
SCN1B-201ENST00000262631 ZBTB43O43298 467 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 NDUFB10O96000 172 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 PDHBP11177 359 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 APLP1P51693 650 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 MKRN3Q13064 507 aaKnown RBP28.49■■■□□ 2.15
SCN1B-201ENST00000262631 ZNF274Q96GC6 653 aaPredicted RBP28.49■■■□□ 2.15
SCN1B-201ENST00000262631 WNK4Q96J92 1243 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 VCPKMTQ9H867 229 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 EMILIN3Q9NT22 766 aa28.49■■■□□ 2.15
SCN1B-201ENST00000262631 DDAH1O94760 285 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 MCM2P49736 904 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 ZNF157P51786 506 aaPredicted RBP28.48■■■□□ 2.15
SCN1B-201ENST00000262631 HMGCS2P54868 508 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 SLFN13Q68D06 897 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 USP17L2Q6R6M4 530 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 SYNE3Q6ZMZ3 975 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 NUP88Q99567 741 aaPredicted RBP28.48■■■□□ 2.15
SCN1B-201ENST00000262631 GOPCQ9HD26 462 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 KCNH4Q9UQ05 1017 aa28.48■■■□□ 2.15
SCN1B-201ENST00000262631 SNHG28P0DPA3 235 aa28.47■■■□□ 2.15
SCN1B-201ENST00000262631 RGMBQ6NW40 437 aa28.47■■■□□ 2.15
SCN1B-201ENST00000262631 RASAL3Q86YV0 1011 aa28.47■■■□□ 2.15
SCN1B-201ENST00000262631 NECAB1Q8N987 351 aa28.47■■■□□ 2.15
SCN1B-201ENST00000262631 TMX3Q96JJ7 454 aa28.47■■■□□ 2.15
SCN1B-201ENST00000262631 NCOA5Q9HCD5 579 aaKnown RBP28.47■■■□□ 2.15
SCN1B-201ENST00000262631 CCT2P78371 535 aaKnown RBP28.46■■■□□ 2.15
SCN1B-201ENST00000262631 SPRYD7Q5W111 196 aa28.46■■■□□ 2.15
SCN1B-201ENST00000262631 FAM217BQ9NTX9 383 aaPredicted RBP28.46■■■□□ 2.15
SCN1B-201ENST00000262631 CXCL11O14625 94 aa28.45■■■□□ 2.15
SCN1B-201ENST00000262631 ST3GAL1Q11201 340 aa28.45■■■□□ 2.15
SCN1B-201ENST00000262631 FANCBQ8NB91 859 aa28.45■■■□□ 2.15
SCN1B-201ENST00000262631 CREBZFQ9NS37 354 aa28.45■■■□□ 2.15
SCN1B-201ENST00000262631 FRMPD2Q68DX3 1309 aaPredicted RBP28.45■■■□□ 2.14
SCN1B-201ENST00000262631 A0A0G2JLL6 359 aaPredicted RBP28.45■■■□□ 2.14
SCN1B-201ENST00000262631 GOLGA8AA7E2F4 631 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 C19orf81C9J6K1 198 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 PFKFB2O60825 505 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 GOLGA8HP0CJ92 632 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 METAP2P50579 478 aaKnown RBP eCLIP28.45■■■□□ 2.14
SCN1B-201ENST00000262631 USP14P54578 494 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 SCRN1Q12765 414 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 PRRT2Q7Z6L0 340 aaPredicted RBP28.45■■■□□ 2.14
SCN1B-201ENST00000262631 STAG2Q8N3U4 1231 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 GMCL1Q96IK5 515 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 MAD2L2Q9UI95 211 aa28.45■■■□□ 2.14
SCN1B-201ENST00000262631 VCAM1P19320 739 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 CDC27P30260 824 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 SLC1A4P43007 532 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 RCAN1P53805 252 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 GRM4Q14833 912 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 SH3D19Q5HYK7 790 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 KCTD1Q719H9 257 aa28.44■■■□□ 2.14
SCN1B-201ENST00000262631 SLKQ9H2G2 1235 aaPredicted RBP28.44■■■□□ 2.14
SCN1B-201ENST00000262631 NID2Q14112 1375 aa28.43■■■□□ 2.14
SCN1B-201ENST00000262631 CALM1P0DP23 149 aa28.43■■■□□ 2.14
SCN1B-201ENST00000262631 CALM2P0DP24 149 aa28.43■■■□□ 2.14
SCN1B-201ENST00000262631 CALM3P0DP25 149 aa28.43■■■□□ 2.14
SCN1B-201ENST00000262631 ADD1P35611 737 aaKnown RBP28.43■■■□□ 2.14
SCN1B-201ENST00000262631 C12orf42Q96LP6 360 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms