RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 EPC1Q9H2F5 836 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 LCMT1Q9UIC8 334 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 DEXIO95424 95 aa12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 FGRP09769 529 aa12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 MAGEA9P43362 315 aa12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 BEND6Q5SZJ8 279 aaPredicted RBP12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 IQCA1Q86XH1 822 aa12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 CERS3Q8IU89 383 aa12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 FAM217BQ9NTX9 383 aaPredicted RBP12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.45
CHRNA1-201ENST00000261007 TRIM66O15016 1216 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 POLR3DP05423 398 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 XBP1P17861 261 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 GRAPQ13588 217 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 SPECC1LQ69YQ0 1117 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 C15orf52Q6ZUT6 534 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 TC2NQ8N9U0 490 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 GRAPLQ8TC17 118 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 DHX58Q96C10 678 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 NSUN4Q96CB9 384 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 GBP3Q9H0R5 595 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 BRMS1Q9HCU9 246 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 RBM28Q9NW13 759 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 ECM29Q5VYK3 1845 aa12.26□□□□□ -0.45
CHRNA1-201ENST00000261007 MINDY4BA8MYZ0 360 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 TMEM232C9JQI7 657 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 CUTAO60888 179 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 TM4SF1P30408 202 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 KCNQ4P56696 695 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 CHMP4BP1P59074 171 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 RAB11FIP4Q86YS3 637 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 FAM177A1Q8N128 213 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 SLC26A6Q9BXS9 759 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 RNF26Q9BY78 433 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 TAF1P21675 1872 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 LAMB1P07942 1786 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 ORC4O43929 436 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 WDHD1O75717 1129 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 GSTO1P78417 241 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 SEC23AQ15436 765 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 SBK1Q52WX2 424 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 SLC27A3Q5K4L6 730 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 ICE2Q659A1 982 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 ADGRA1Q86SQ6 560 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 CNBD1Q8NA66 436 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 SDR42E1Q8WUS8 393 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 NAA15Q9BXJ9 866 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 FOXP1Q9H334 677 aaPredicted RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 CDC23Q9UJX2 597 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 L1RE1Q9UN81 338 aa12.25□□□□□ -0.45
CHRNA1-201ENST00000261007 MROH7-TTC4A0A0A0MT08 1334 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 TNKSO95271 1327 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 KIF28PB7ZC32 967 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 RANBP6O60518 1105 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 PPFIA3O75145 1194 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 DDAH1O94760 285 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 CCDC175P0C221 793 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 MECOMQ03112 1051 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 RESP18Q5W5W9 173 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 TOGARAM2Q6ZUX3 1019 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 PHKBQ93100 1093 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 PANX2Q96RD6 677 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 ZSCAN10Q96SZ4 725 aaPredicted RBP12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 ACBD3Q9H3P7 528 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 ANKZF1Q9H8Y5 726 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 VPS18Q9P253 973 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 HOOK1Q9UJC3 728 aaKnown RBP12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 TACC3Q9Y6A5 838 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 XDHP47989 1333 aa12.24□□□□□ -0.45
CHRNA1-201ENST00000261007 MMP1P03956 469 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 ZNF18P17022 549 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 RXRAP19793 462 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 GYS2P54840 703 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 CCDC178Q5BJE1 867 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 RILPL1Q5EBL4 403 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 ISM2Q6H9L7 571 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 ZNF804AQ7Z570 1209 aa12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
CHRNA1-201ENST00000261007 ENOX1Q8TC92 643 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms