RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TMTC1Q8IUR5 882 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 TC2NQ8N9U0 490 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 TRIML1Q8N9V2 468 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 RGS22Q8NE09 1264 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 RABGGTAQ92696 567 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 PLEKHA4Q9H4M7 779 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 MRPL44Q9H9J2 332 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 L2HGDHQ9H9P8 463 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 FBXO2Q9UK22 296 aaPredicted RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 TTF2Q9UNY4 1162 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 PARP3Q9Y6F1 533 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 SPATA31A3Q5VYP0 1347 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 PIK3C2AO00443 1686 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CPDO75976 1380 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 C1orf167Q5SNV9 1468 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 MYO1BO43795 1136 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CALM1P0DP23 149 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CALM2P0DP24 149 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CALM3P0DP25 149 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 ERCC5P28715 1186 aaPredicted RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 ARID5AQ03989 594 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 MAP9Q49MG5 647 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CC2D1AQ6P1N0 951 aaPredicted RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 SRGAP1Q7Z6B7 1085 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 FCHSD1Q86WN1 690 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 REXO1L1PQ8IX06 675 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CSGALNACT2Q8N6G5 542 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 SEC63Q9UGP8 760 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 SAP30BPQ9UHR5 308 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 CDC23Q9UJX2 597 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 GDAQ9Y2T3 454 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 SLIT1O75093 1534 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 KRT86O43790 486 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CLSTN1O94985 981 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 GOLGA8HP0CJ92 632 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 CYLC1P35663 651 aaPredicted RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 NAPAP54920 295 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 NCAPH2Q6IBW4 605 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 NBPF5PQ86XG9 351 aaPredicted RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 CCDC42Q96M95 316 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 RNF26Q9BY78 433 aaPredicted RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 RBM28Q9NW13 759 aaKnown RBP5.34□□□□□ -1.55
USP44-201ENST00000258499 ZNF446Q9NWS9 450 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 HPSEQ9Y251 543 aa5.34□□□□□ -1.55
USP44-201ENST00000258499 AKAP12Q02952 1782 aa5.34□□□□□ -1.56
USP44-201ENST00000258499 SMIM22K7EJ46 135 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 USO1O60763 962 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 CSF1RP07333 972 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 CALML3P27482 149 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 TOB1P50616 345 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 COPB1P53618 953 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 ST5P78524 1137 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 TFAP4Q01664 338 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 PDE4DQ08499 809 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 KIF5AQ12840 1032 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 IKQ13123 557 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 KRT31Q15323 416 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 DDB1Q16531 1140 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 INF2Q27J81 1249 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 BRINP3Q76B58 766 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 ENAHQ8N8S7 591 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 NKX2-3Q8TAU0 364 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 MAP3K14Q99558 947 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 BAZ2BQ9UIF8 2168 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 TRIM49BA6NDI0 452 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 FOXP2O15409 715 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 SCG2P13521 617 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 BMP6P22004 513 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 MRPS25P82663 173 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 TRIM28Q13263 835 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 CUL4BQ13620 913 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 NWD1Q149M9 1564 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 NTRK3Q16288 839 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 RAD9BQ6WBX8 426 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 GSDMAQ96QA5 445 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.33□□□□□ -1.56
USP44-201ENST00000258499 SUGCTQ9HAC7 445 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 CCDC87Q9NVE4 849 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 ADGRG1Q9Y653 693 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 EPN1Q9Y6I3 576 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 FAM170AA1A519 330 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 ANKRD65E5RJM6 399 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 H0YHG0 523 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 MFAP3LO75121 409 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 ZPR1O75312 459 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 RPN1P04843 607 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 H2AFXP16104 143 aaPredicted RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 PLA2G4AP47712 749 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 FXR1P51114 621 aaKnown RBP eCLIP5.33□□□□□ -1.56
USP44-201ENST00000258499 RNASE9P60153 205 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 SMIM5Q71RC9 77 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 OR8K1Q8NGG5 319 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 CALML4Q96GE6 196 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 NLRP3Q96P20 1036 aa5.33□□□□□ -1.56
USP44-201ENST00000258499 PYM1Q9BRP8 204 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 NOC4LQ9BVI4 516 aaKnown RBP5.33□□□□□ -1.56
USP44-201ENST00000258499 NAA15Q9BXJ9 866 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms