RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 UNC13BO14795 1591 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 BACH1O14867 736 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 KRT15P19012 456 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 STX2P32856 288 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TAF12Q16514 161 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TRIML1Q8N9V2 468 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 DNM3Q9UQ16 869 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 OPHN1O60890 802 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 PPP1R21Q6ZMI0 780 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CDC37L1Q7L3B6 337 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 C16orf71Q8IYS4 520 aaPredicted RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RILPQ96NA2 401 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 MYO1AQ9UBC5 1043 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 BZW2Q9Y6E2 419 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 KRIT1O00522 736 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 IDI1Q13907 227 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 LMBR1LQ6UX01 489 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RSPH3Q86UC2 560 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 C2CD5Q86YS7 1000 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 GSDMBQ8TAX9 411 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 NSMCE1Q8WV22 266 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 ZNF622Q969S3 477 aaKnown RBP eCLIP5.29□□□□□ -1.562e-6■■□□□ 11.6
RC3H1-201ENST00000258349 PLIN2Q99541 437 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 LSM14BQ9BX40 385 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 STK38LQ9Y2H1 464 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 ORC6Q9Y5N6 252 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RLBP1P12271 317 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 COG7P83436 770 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 ANKRD20A3Q5VUR7 823 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RIC8AQ9NPQ8 531 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TRIM35Q9UPQ4 493 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 NIP7Q9Y221 180 aaKnown RBP eCLIP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 ADCY9O60503 1353 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 KDRP35968 1356 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 THAP12O43422 761 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CEP104O60308 925 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 VAMP4O75379 141 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 MBD4O95243 580 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RNASE9P60153 205 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TNNI3KQ59H18 835 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 PIK3AP1Q6ZUJ8 805 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 SDCCAG3Q96C92 435 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CARD10Q9BWT7 1032 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CNOT10Q9H9A5 744 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 BCL2L12Q9HB09 334 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 NFE2L3Q9Y4A8 694 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 FPGT-TNNI3KV9GXZ4 949 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 GLI2P10070 1586 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 STAM2O75886 525 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RBBP5Q15291 538 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TRIM68Q6AZZ1 485 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 REXO1Q8N1G1 1221 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 SLC17A8Q8NDX2 589 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TSC1Q92574 1164 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TEKT1Q969V4 418 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 METTL22Q9BUU2 404 aaPredicted RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 PICK1Q9NRD5 415 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TXLNGQ9NUQ3 528 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CTTNBP2NLQ9P2B4 639 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RNF17Q9BXT8 1623 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 XRCC5P13010 732 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RBM6P78332 1123 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RAD51AP2Q09MP3 1159 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 KRT81Q14533 505 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 TYW1BQ6NUM6 668 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 EFCAB13Q8IY85 973 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 MIGA1Q8NAN2 632 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 BBOF1Q8ND07 529 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RABGGTAQ92696 567 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 EYA3Q99504 573 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RRAGDQ9NQL2 400 aaPredicted RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 PA2G4Q9UQ80 394 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 KIAA0232Q92628 1395 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 FOXO3O43524 673 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 PDE1CQ14123 709 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MIER3Q7Z3K6 550 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 DCAF5Q96JK2 942 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 PASKQ96RG2 1323 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 TXNDC9O14530 226 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 IRS4O14654 1257 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SGSM2O43147 1006 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MGEA5O60502 916 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 GCKP35557 465 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 RNASELQ05823 741 aaKnown RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 KLHL30Q0D2K2 578 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 SLFN12Q8IYM2 578 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MGARPQ8TDB4 240 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 HOOK2Q96ED9 719 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 HYOU1Q9Y4L1 999 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 PPLO60437 1756 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC88CQ9P219 2028 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 FRMPD1Q5SYB0 1578 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 PSDA5PKW4 1024 aaPredicted RBP5.28□□□□□ -1.56
RC3H1-201ENST00000258349 IL2RBP14784 551 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 HSP90AA5PQ58FG0 334 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 LRRC8AQ8IWT6 810 aa5.28□□□□□ -1.56
RC3H1-201ENST00000258349 MIS12Q9H081 205 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms