RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 TMEM63CQ9P1W3 806 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 SATB2Q9UPW6 733 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 CALCRLQ16602 461 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 JADE2Q9NQC1 790 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 STIM2Q9P246 746 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 VPS18Q9P253 973 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 SEC31BQ9NQW1 1179 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 FSD2A1L4K1 749 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 HLTFQ14527 1009 aaKnown RBP eCLIP12.11□□□□□ -0.47
URB2-201ENST00000258243 DCAF17Q5H9S7 520 aaPredicted RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 C21orf2O43822 256 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 PPFIA2O75334 1257 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 RNF8O76064 485 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 TPD52P55327 224 aaPredicted RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 ZBTB9Q96C00 473 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 MYCBPQ99417 103 aaPredicted RBP12.11□□□□□ -0.47
URB2-201ENST00000258243 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 SNX14Q9Y5W7 946 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 ABCC4O15439 1325 aa12.11□□□□□ -0.47
URB2-201ENST00000258243 GMNNO75496 209 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 CPA1P15085 419 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 EN1Q05925 392 aaPredicted RBP12.1□□□□□ -0.47
URB2-201ENST00000258243 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
URB2-201ENST00000258243 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
URB2-201ENST00000258243 SLFN13Q68D06 897 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 CNNM4Q6P4Q7 775 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 HAUS7Q99871 368 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 PHKA1P46020 1223 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 CCDC121Q6ZUS5 278 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 FBXO11Q86XK2 927 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
URB2-201ENST00000258243 MRPS9P82933 396 aaKnown RBP12.1□□□□□ -0.47
URB2-201ENST00000258243 ZNF365Q70YC5 407 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 MAEAQ7L5Y9 396 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 MAATS1Q7Z4T9 603 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.1□□□□□ -0.47
URB2-201ENST00000258243 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 ELP1O95163 1332 aa12.1□□□□□ -0.47
URB2-201ENST00000258243 E7EWF7 191 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 WHAMMP3Q1A5X7 153 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 RAB3IL1Q8TBN0 382 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 MGEA5O60502 916 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 GAS7O60861 476 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 GADD45BO75293 160 aaPredicted RBP12.09□□□□□ -0.47
URB2-201ENST00000258243 GJC1P36383 396 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 CDK12Q9NYV4 1490 aaPredicted RBP12.09□□□□□ -0.47
URB2-201ENST00000258243 KRT5P13647 590 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 ANKS4BQ8N8V4 417 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
URB2-201ENST00000258243 CCDC110Q8TBZ0 833 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 LMBR1Q8WVP7 490 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 TMEM232C9JQI7 657 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 TRAF5O00463 557 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 ARID5AQ03989 594 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 KIAA0753Q2KHM9 967 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 DDX12PQ92771 950 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
URB2-201ENST00000258243 NCOA5Q9HCD5 579 aaKnown RBP12.09□□□□□ -0.47
URB2-201ENST00000258243 COPRSQ9NQ92 184 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 SERPINA10Q9UK55 444 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
URB2-201ENST00000258243 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
URB2-201ENST00000258243 SLMAPQ14BN4 828 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 KIFAP3Q92845 792 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 CRB1P82279 1406 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 NCAPD2Q15021 1401 aa12.09□□□□□ -0.47
URB2-201ENST00000258243 HSF2BPO75031 334 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 NR1I2O75469 434 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 ELF2Q15723 593 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 ZNF654Q8IZM8 581 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 VCXQ9H320 206 aa12.08□□□□□ -0.48
URB2-201ENST00000258243 PSTPIP2Q9H939 334 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms