RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 NTRK3Q16288 839 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 NUP188Q5SRE5 1749 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
MSI1-201ENST00000257552 MCAMP43121 646 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 CCT5P48643 541 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 TUBB2AQ13885 445 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
MSI1-201ENST00000257552 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
MSI1-201ENST00000257552 TADA2BQ86TJ2 420 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 MSL3Q8N5Y2 521 aaKnown RBP16.66■□□□□ 0.26
MSI1-201ENST00000257552 TUBB2BQ9BVA1 445 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 EHD4Q9H223 541 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 FAM217BQ9NTX9 383 aaPredicted RBP16.66■□□□□ 0.26
MSI1-201ENST00000257552 N4BP3O15049 544 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 GGCXP38435 758 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
MSI1-201ENST00000257552 GEMIN8Q9NWZ8 242 aaKnown RBP16.66■□□□□ 0.26
MSI1-201ENST00000257552 IL6STP40189 918 aaPredicted RBP16.65■□□□□ 0.26
MSI1-201ENST00000257552 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 BRMS1Q9HCU9 246 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 HPCAL4Q9UM19 191 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 PBX1P40424 430 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 PHKA1P46020 1223 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 STIM1Q13586 685 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 CHP1Q99653 195 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 A0A087X0B3 334 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 PRPF6O94906 941 aaKnown RBP16.65■□□□□ 0.26
MSI1-201ENST00000257552 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
MSI1-201ENST00000257552 TUBB4BP68371 445 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 TTC19Q6DKK2 380 aaPredicted RBP16.65■□□□□ 0.26
MSI1-201ENST00000257552 TMTC1Q8IUR5 882 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
MSI1-201ENST00000257552 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
MSI1-201ENST00000257552 PAPPAQ13219 1627 aa16.65■□□□□ 0.26
MSI1-201ENST00000257552 AMPD2Q01433 879 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 WDR93Q6P2C0 686 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 ABHD10Q9NUJ1 306 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 TAB2Q9NYJ8 693 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 CTNND2Q9UQB3 1225 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 ITGB4P16144 1822 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 PDE8AO60658 829 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 KRT9P35527 623 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 USP14P54578 494 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 ZKSCAN3Q9BRR0 538 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 KAT14Q9H8E8 782 aa16.64■□□□□ 0.25
MSI1-201ENST00000257552 A0A087WUV0 522 aaPredicted RBP16.63■□□□□ 0.25
MSI1-201ENST00000257552 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
MSI1-201ENST00000257552 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
MSI1-201ENST00000257552 NGLY1Q96IV0 654 aa16.63■□□□□ 0.25
MSI1-201ENST00000257552 NCAPGQ9BPX3 1015 aa16.63■□□□□ 0.25
MSI1-201ENST00000257552 WTIPA6NIX2 430 aaPredicted RBP16.63■□□□□ 0.25
MSI1-201ENST00000257552 MMP1P03956 469 aa16.63■□□□□ 0.25
MSI1-201ENST00000257552 DPYDQ12882 1025 aa16.63■□□□□ 0.25
MSI1-201ENST00000257552 IGDCC4Q8TDY8 1250 aa16.63■□□□□ 0.25
MSI1-201ENST00000257552 PLA2G12BQ9BX93 195 aa16.63■□□□□ 0.25
MSI1-201ENST00000257552 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 PES1O00541 588 aaKnown RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 ATP1A1P05023 1023 aaKnown RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 MYBL2P10244 700 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 CUL4BQ13620 913 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 CYP26C1Q6V0L0 522 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 MMS22LQ6ZRQ5 1243 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 KAT2BQ92831 832 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 CTAGE1Q96RT6 745 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 MYCBPQ99417 103 aaPredicted RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 ERLIN2O94905 339 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 PDE8BO95263 885 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 TUBBP07437 444 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 KRT31Q15323 416 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 CDKAL1Q5VV42 579 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 FBXW10Q5XX13 1052 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 KANK3Q6NY19 840 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 LY9Q9HBG7 655 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 MAPK8IP1Q9UQF2 711 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 CDHR2Q9BYE9 1310 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
MSI1-201ENST00000257552 ZNF34Q8IZ26 560 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 COG1Q8WTW3 980 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 PAGE5Q96GU1 130 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
MSI1-201ENST00000257552 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
MSI1-201ENST00000257552 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms