RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 CPA4Q9UI42 421 aa10.16□□□□□ -0.78
TMEM258-201ENST00000257262 SLC45A1Q9Y2W3 748 aa10.16□□□□□ -0.78
TMEM258-201ENST00000257262 ROBO3Q96MS0 1386 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 ADGRA2Q96PE1 1338 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 PRDM1O75626 825 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 FGAP02671 866 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 RASA1P20936 1047 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.78
TMEM258-201ENST00000257262 CTDSPL2Q05D32 466 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 ALX1Q15699 326 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 CTU1Q7Z7A3 348 aaKnown RBP10.15□□□□□ -0.78
TMEM258-201ENST00000257262 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 ZNF444Q8N0Y2 327 aaPredicted RBP10.15□□□□□ -0.78
TMEM258-201ENST00000257262 CD99L2Q8TCZ2 262 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 ERO1AQ96HE7 468 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 PARK7Q99497 189 aaKnown RBP10.15□□□□□ -0.78
TMEM258-201ENST00000257262 FEZ1Q99689 392 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 MCOLN1Q9GZU1 580 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 KIAA1683Q9H0B3 1180 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 INCENPQ9NQS7 918 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
TMEM258-201ENST00000257262 GREB1LQ9C091 1923 aaPredicted RBP10.15□□□□□ -0.79
TMEM258-201ENST00000257262 ZSWIM8A7E2V4 1837 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 OSBPP22059 807 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 USP14P54578 494 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 CAP1Q01518 475 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 PDE4BQ07343 736 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 PABPC4Q13310 644 aaKnown RBP eCLIP10.14□□□□□ -0.791e-19■■■■□ 24.7
TMEM258-201ENST00000257262 CLEC10AQ8IUN9 316 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 C12orf42Q96LP6 360 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.14□□□□□ -0.79
TMEM258-201ENST00000257262 IL25Q9H293 177 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 ZNF287Q9HBT7 754 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 ANAPC4Q9UJX5 808 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 TACC3Q9Y6A5 838 aa10.14□□□□□ -0.79
TMEM258-201ENST00000257262 SLC3A2P08195 630 aaKnown RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 EEF2P13639 858 aaKnown RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 CHMLP26374 656 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 HOXA7P31268 230 aaPredicted RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 LACTBP83111 547 aaPredicted RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 ICA1Q05084 483 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 FAM47AQ5JRC9 791 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 SMCR8Q8TEV9 937 aaPredicted RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 P2RX7Q99572 595 aaKnown RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 ARHGAP39Q9C0H5 1083 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 ASCC2Q9H1I8 757 aaPredicted RBP10.13□□□□□ -0.79
TMEM258-201ENST00000257262 KANSL2Q9H9L4 492 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 TMX2Q9Y320 296 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 MGAMO43451 1857 aa10.13□□□□□ -0.79
TMEM258-201ENST00000257262 ZMYM6O95789 1325 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 CCDC85CA6NKD9 419 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 TSPY3P0CV98 308 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 TSPY8P0CW00 308 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 BCRP11274 1271 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 VCAM1P19320 739 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 CTGFP29279 349 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 HAND2P61296 217 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 IRX3P78415 501 aaPredicted RBP10.12□□□□□ -0.79
TMEM258-201ENST00000257262 TFAP4Q01664 338 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 ATP2B2Q01814 1243 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 KIF22Q14807 665 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 ERICH6BQ5W0A0 696 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 CATSPERGQ6ZRH7 1159 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 OTOP1Q7RTM1 612 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 ABHD8Q96I13 439 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 PPP4R2Q9NY27 417 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
TMEM258-201ENST00000257262 TRIM17Q9Y577 477 aa10.12□□□□□ -0.79
TMEM258-201ENST00000257262 MYH4Q9Y623 1939 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 IGKV6D-41A0A0C4DH26 115 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 STK25O00506 426 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 ZNF213O14771 459 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 FGRP09769 529 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 HERVK_113P62684 666 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 MLLT1Q03111 559 aaPredicted RBP10.11□□□□□ -0.79
TMEM258-201ENST00000257262 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
TMEM258-201ENST00000257262 NEDD1Q8NHV4 660 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 RUFY2Q8WXA3 655 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 DSCC1Q9BVC3 393 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 RPAP3Q9H6T3 665 aaPredicted RBP10.11□□□□□ -0.79
TMEM258-201ENST00000257262 SH2D4AQ9H788 454 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 VCPKMTQ9H867 229 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 NYAP2Q9P242 653 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 RBPJLQ9UBG7 517 aa10.11□□□□□ -0.79
TMEM258-201ENST00000257262 CLIP2Q9UDT6 1046 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms