RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ITIH3Q06033 890 aa22.98■■□□□ 1.27
RARA-201ENST00000254066 PREPLQ4J6C6 727 aaPredicted RBP22.98■■□□□ 1.27
RARA-201ENST00000254066 JPH2Q9BR39 696 aaPredicted RBP22.98■■□□□ 1.27
RARA-201ENST00000254066 MCM8Q9UJA3 840 aa22.98■■□□□ 1.27
RARA-201ENST00000254066 NDUFA10O95299 355 aa22.98■■□□□ 1.27
RARA-201ENST00000254066 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
RARA-201ENST00000254066 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
RARA-201ENST00000254066 IP6K1Q92551 441 aa22.98■■□□□ 1.27
RARA-201ENST00000254066 ANGEL1Q9UNK9 670 aaKnown RBP22.98■■□□□ 1.27
RARA-201ENST00000254066 RILPL1Q5EBL4 403 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 ANKRD18AQ8IVF6 992 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 NOSTRINQ8IVI9 506 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 SRPRBQ9Y5M8 271 aaKnown RBP22.97■■□□□ 1.27
RARA-201ENST00000254066 SRRM3A6NNA2 597 aaPredicted RBP22.97■■□□□ 1.27
RARA-201ENST00000254066 NDUFAB1O14561 156 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 ELF1P32519 619 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 DRP2Q13474 957 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 EMC10Q5UCC4 262 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 AIFM3Q96NN9 605 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 GSDMAQ96QA5 445 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 SLF1Q9BQI6 1058 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 CEP131Q9UPN4 1083 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 BCL9LQ86UU0 1499 aa22.97■■□□□ 1.27
RARA-201ENST00000254066 SMTNP53814 917 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 MMGT1Q8N4V1 131 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 WASF1Q92558 559 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 GUCA1BQ9UMX6 200 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 SLIT2O94813 1529 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 SH2B2O14492 632 aaPredicted RBP22.96■■□□□ 1.27
RARA-201ENST00000254066 FGAP02671 866 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 WLSQ5T9L3 541 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 ZKSCAN4Q969J2 545 aaPredicted RBP22.96■■□□□ 1.27
RARA-201ENST00000254066 OSBP2Q969R2 916 aa22.96■■□□□ 1.27
RARA-201ENST00000254066 SIPA1L3O60292 1781 aaPredicted RBP22.95■■□□□ 1.27
RARA-201ENST00000254066 CCDC189A1A4V9 331 aa22.95■■□□□ 1.26
RARA-201ENST00000254066 IARSP41252 1262 aaKnown RBP22.95■■□□□ 1.26
RARA-201ENST00000254066 SSR1P43307 286 aaKnown RBP22.95■■□□□ 1.26
RARA-201ENST00000254066 NBPF10Q6P3W6 841 aaKnown RBP22.95■■□□□ 1.26
RARA-201ENST00000254066 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
RARA-201ENST00000254066 MPRIPQ6WCQ1 1025 aa22.95■■□□□ 1.26
RARA-201ENST00000254066 NUP88Q99567 741 aaPredicted RBP22.95■■□□□ 1.26
RARA-201ENST00000254066 MYD88Q99836 296 aa22.95■■□□□ 1.26
RARA-201ENST00000254066 ALS2Q96Q42 1657 aa22.95■■□□□ 1.26
RARA-201ENST00000254066 ATP1A1P05023 1023 aaKnown RBP22.94■■□□□ 1.26
RARA-201ENST00000254066 IFIT1P09914 478 aaKnown RBP22.94■■□□□ 1.26
RARA-201ENST00000254066 KRT83P78385 493 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 ZNF572Q7Z3I7 529 aaPredicted RBP22.94■■□□□ 1.26
RARA-201ENST00000254066 BSDC1Q9NW68 430 aaPredicted RBP22.94■■□□□ 1.26
RARA-201ENST00000254066 REXO2Q9Y3B8 237 aaKnown RBP22.94■■□□□ 1.26
RARA-201ENST00000254066 ECM29Q5VYK3 1845 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 ZNF213O14771 459 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 FOXP2O15409 715 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 MYBL2P10244 700 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 C1orf141Q5JVX7 400 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 JAKMIP2Q96AA8 810 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 MIEF2Q96C03 454 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 MYH8P13535 1937 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 SLIT3O75094 1523 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 ABCA3Q99758 1704 aa22.94■■□□□ 1.26
RARA-201ENST00000254066 ERCC3P19447 782 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 KRT9P35527 623 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 APBA1Q02410 837 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 SAFBQ15424 915 aaKnown RBP eCLIP22.93■■□□□ 1.26
RARA-201ENST00000254066 EMBQ6PCB8 327 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 SH3RF1Q7Z6J0 888 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 VEZTQ9HBM0 779 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 KRT86O43790 486 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 NTRK3Q16288 839 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 SPECC1Q5M775 1068 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 FOXP1Q9H334 677 aaPredicted RBP22.93■■□□□ 1.26
RARA-201ENST00000254066 TBC1D2BQ9UPU7 963 aa22.93■■□□□ 1.26
RARA-201ENST00000254066 PARP4Q9UKK3 1724 aaKnown RBP22.93■■□□□ 1.26
RARA-201ENST00000254066 N4BP3O15049 544 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 CALRP27797 417 aaKnown RBP22.92■■□□□ 1.26
RARA-201ENST00000254066 HAND2P61296 217 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 CCDC50Q8IVM0 306 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 MAGEC3Q8TD91 643 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 NEUROD6Q96NK8 337 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 EHD4Q9H223 541 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 VCPKMTQ9H867 229 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 MYO5AQ9Y4I1 1855 aaKnown RBP22.92■■□□□ 1.26
RARA-201ENST00000254066 LTN1O94822 1766 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 PRAMEF22A3QJZ6 481 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 PPP1R3GB7ZBB8 358 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 MYO1FO00160 1098 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 PPP1R12AO14974 1030 aaPredicted RBP22.92■■□□□ 1.26
RARA-201ENST00000254066 CD44P16070 742 aaKnown RBP22.92■■□□□ 1.26
RARA-201ENST00000254066 NF2P35240 595 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 MRPL12P52815 198 aaKnown RBP22.92■■□□□ 1.26
RARA-201ENST00000254066 EPHB4P54760 987 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 NNTQ13423 1086 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 APOA5Q6Q788 366 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 TMEM87BQ96K49 555 aa22.92■■□□□ 1.26
RARA-201ENST00000254066 TNFRSF8P28908 595 aa22.91■■□□□ 1.26
RARA-201ENST00000254066 TOB1P50616 345 aaPredicted RBP22.91■■□□□ 1.26
RARA-201ENST00000254066 KRT31Q15323 416 aa22.91■■□□□ 1.26
RARA-201ENST00000254066 OR8K1Q8NGG5 319 aa22.91■■□□□ 1.26
RARA-201ENST00000254066 TBC1D22AQ8WUA7 517 aa22.91■■□□□ 1.26
RARA-201ENST00000254066 UPF1Q92900 1129 aaKnown RBP eCLIP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms