RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 GPKOWQ92917 476 aaPredicted RBP eCLIP19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 TSG101Q99816 390 aa19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 FAM204AQ9H8W3 233 aa19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 ITSN1Q15811 1721 aa19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 CALML3P27482 149 aa19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 HPS5Q9UPZ3 1129 aa19.7■□□□□ 0.74
NDFIP1-201ENST00000253814 GOLGA6CA6NDK9 693 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 GOLGA6DP0CG33 693 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 CALM1P0DP23 149 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 CALM2P0DP24 149 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 CALM3P0DP25 149 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 PTPREP23469 700 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 ERCC5P28715 1186 aaPredicted RBP19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 COPB1P53618 953 aaKnown RBP19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 STRBPQ96SI9 672 aaKnown RBP19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 GOLGA6AQ9NYA3 693 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 IL17RAQ96F46 866 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 FOXP1Q9H334 677 aaPredicted RBP19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 ZNF652Q9Y2D9 606 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 PARP3Q9Y6F1 533 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 FAM205CA6NFA0 338 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 PRPF4BQ13523 1007 aaKnown RBP19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 HLFQ16534 295 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 HEG1Q9ULI3 1381 aa19.69■□□□□ 0.74
NDFIP1-201ENST00000253814 RAD51AP2Q09MP3 1159 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 TYW1BQ6NUM6 668 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 CERS3Q8IU89 383 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 MRPL44Q9H9J2 332 aaKnown RBP19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 IRX5P78411 483 aaPredicted RBP19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 TMEM266Q2M3C6 531 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 CRACR2BQ8N4Y2 399 aaPredicted RBP19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 CCDC113Q9H0I3 377 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 TFCP2L1Q9NZI6 479 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 UTYO14607 1347 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 GOLGA6BA6NDN3 693 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 PLA2G4AP47712 749 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 DYMQ7RTS9 669 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 SUGCTQ9HAC7 445 aa19.68■□□□□ 0.74
NDFIP1-201ENST00000253814 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 TUBB4BP68371 445 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 TTLL11Q8NHH1 800 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 L2HGDHQ9H9P8 463 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 LY9Q9HBG7 655 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 SRPRBQ9Y5M8 271 aaKnown RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 MPHOSPH10O00566 681 aaKnown RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 SRGAP2O75044 1071 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 TUBBP07437 444 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 ACTN2P35609 894 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 CYP27A1Q02318 531 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 RASGRF1Q13972 1273 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 CASP8Q14790 479 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 WHAMMP3Q1A5X7 153 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 GOLGA5Q8TBA6 731 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 TMX4Q9H1E5 349 aaPredicted RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 ZBTB1Q9Y2K1 713 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 RRP15Q9Y3B9 282 aaKnown RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 USP8P40818 1118 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 NCAPHQ15003 741 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 PTPROQ16827 1216 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 CT47A1Q5JQC4 288 aaPredicted RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 PAGE5Q96GU1 130 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 GOPCQ9HD26 462 aa19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 RBM28Q9NW13 759 aaKnown RBP19.67■□□□□ 0.74
NDFIP1-201ENST00000253814 PALLDQ8WX93 1383 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 ERVV-2B6SEH9 535 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 TRIM14Q14142 442 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 ZSCAN10Q96SZ4 725 aaPredicted RBP19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 GDAQ9Y2T3 454 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 FHOD1Q9Y613 1164 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 ADGRG1Q9Y653 693 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 GIGYF2Q6Y7W6 1299 aaKnown RBP19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 C2CD5Q86YS7 1000 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 SECISBP2LQ93073 1101 aaKnown RBP19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 MRFAP1Q9Y605 127 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 ATP8B1O43520 1251 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 DYNLL1P63167 89 aaKnown RBP19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 GSDMAQ96QA5 445 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 ANKRD26Q9UPS8 1709 aa19.66■□□□□ 0.74
NDFIP1-201ENST00000253814 COL15A1P39059 1388 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 PLEKHA8P1O95397 391 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 FGFR1OPO95684 399 aaKnown RBP19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 CYP2C19P33261 490 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 IFFO1Q0D2I5 559 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 SF3A3Q12874 501 aaKnown RBP eCLIP19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 KRT31Q15323 416 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 REXO1L1PQ8IX06 675 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 TC2NQ8N9U0 490 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 MFAP3LO75121 409 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 TXKP42681 527 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 NLRC4Q9NPP4 1024 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 TUBE1Q9UJT0 475 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 TECPR2O15040 1411 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 B4DLN1 442 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 RPN1P04843 607 aaKnown RBP19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 LIFRP42702 1097 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 INF2Q27J81 1249 aa19.65■□□□□ 0.74
NDFIP1-201ENST00000253814 CCDC51Q96ER9 411 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms