RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 CLCN1P35523 988 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
UBE4B-201ENST00000253251 PLIN2Q99541 437 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 MCAMP43121 646 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 RCAN1P53805 252 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 NCAPH2Q6IBW4 605 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 TTLL6Q8N841 843 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 TTC14Q96N46 770 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 USP28Q96RU2 1077 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 CCDC102AQ96A19 550 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 IWS1Q96ST2 819 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 JADE2Q9NQC1 790 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 USP17L3A6NCW0 530 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 USP17L4A6NCW7 530 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 FOXO4P98177 505 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 ALX1Q15699 326 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 USP17L1Q7RTZ2 530 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 LONP1P36776 959 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 GNPTABQ3T906 1256 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 NOC4LQ9BVI4 516 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 GCOM1H8Y6P7 765 aaPredicted RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 POLR2MP0CAP2 368 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 ZRSR2Q15696 482 aaKnown RBP16.8■□□□□ 0.28
UBE4B-201ENST00000253251 HSP90AA4PQ58FG1 418 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 NSMFQ6X4W1 530 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 CSGALNACT2Q8N6G5 542 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 TSGA10Q9BZW7 698 aa16.8■□□□□ 0.28
UBE4B-201ENST00000253251 MECOMQ03112 1051 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 TBC1D8BQ0IIM8 1120 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 AMNQ9BXJ7 453 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 PPP6R2O75170 966 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
UBE4B-201ENST00000253251 CTNNA2P26232 953 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 HOXA7P31268 230 aaPredicted RBP16.79■□□□□ 0.28
UBE4B-201ENST00000253251 KCNQ4P56696 695 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 DYNLL1P63167 89 aaKnown RBP16.79■□□□□ 0.28
UBE4B-201ENST00000253251 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 SPATA31A5Q5VU36 1347 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 SPATA31A7Q8IWB4 1347 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
UBE4B-201ENST00000253251 USH1GQ495M9 461 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 CPXCR1Q8N123 301 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 CEP112Q8N8E3 955 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
UBE4B-201ENST00000253251 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 USP14P54578 494 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 RBSNQ9H1K0 784 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 POLR3EQ9NVU0 708 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 ZBTB21Q9ULJ3 1066 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
UBE4B-201ENST00000253251 TUBBP07437 444 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 KIFC2Q96AC6 838 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 PFKFB1P16118 471 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 KIAA1468Q9P260 1216 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 GNA14O95837 355 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 GCFC2P16383 781 aaKnown RBP16.78■□□□□ 0.28
UBE4B-201ENST00000253251 FANCCQ00597 558 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 SULF1Q8IWU6 871 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 DCPSQ96C86 337 aaKnown RBP16.78■□□□□ 0.28
UBE4B-201ENST00000253251 SLC5A4Q9NY91 659 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 RABGAP1Q9Y3P9 1069 aa16.78■□□□□ 0.28
UBE4B-201ENST00000253251 CTAGE9A4FU28 777 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 DYNC1I1O14576 645 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 MYCLP12524 364 aaPredicted RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 HERC4Q5GLZ8 1057 aaPredicted RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 PI16Q6UXB8 463 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 ARHGEF28Q8N1W1 1705 aaKnown RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 CTAGE15A4D2H0 777 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 CTAGE8P0CG41 777 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 SLC39A14Q15043 492 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 DALRD3Q5D0E6 543 aaKnown RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 CTAGE6Q86UF2 777 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 CTAGE4Q8IX94 777 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 ZNF34Q8IZ26 560 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 LRRC47Q8N1G4 583 aaKnown RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
UBE4B-201ENST00000253251 CEP83Q9Y592 693 aa16.77■□□□□ 0.28
UBE4B-201ENST00000253251 MST1RQ04912 1400 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 BTBD18B2RXH4 712 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.27
UBE4B-201ENST00000253251 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.27
UBE4B-201ENST00000253251 CSRNP1Q96S65 589 aa16.77■□□□□ 0.27
UBE4B-201ENST00000253251 AZI2Q9H6S1 392 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms