RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 GUCY1A2P33402 732 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 Q3C1V9 767 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 MORN1Q5T089 497 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 LBX2Q6XYB7 198 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 SIRT2Q8IXJ6 389 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.54□□□□□ -0.4
VPS50-201ENST00000251739 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 OGDHLQ9ULD0 1010 aa12.54□□□□□ -0.4
VPS50-201ENST00000251739 GREB1LQ9C091 1923 aaPredicted RBP12.54□□□□□ -0.4
VPS50-201ENST00000251739 TCRBV5S4A2TA0A5A2 114 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 VCAM1P19320 739 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 USP5P45974 858 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 PLCD1P51178 756 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 DSG2Q14126 1118 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 HSP90AB4PQ58FF6 505 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 GPR142Q7Z601 462 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 ACER1Q8TDN7 264 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
VPS50-201ENST00000251739 NUDT12Q9BQG2 462 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
VPS50-201ENST00000251739 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 ZBTB40Q9NUA8 1239 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 COL6A3P12111 3177 aa12.53□□□□□ -0.4
VPS50-201ENST00000251739 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 EVI5O60447 810 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 CYP2B6P20813 491 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 TTF1Q15361 905 aaPredicted RBP12.52□□□□□ -0.41
VPS50-201ENST00000251739 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.41
VPS50-201ENST00000251739 RPAP2Q8IXW5 612 aaPredicted RBP12.52□□□□□ -0.41
VPS50-201ENST00000251739 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
VPS50-201ENST00000251739 APBA2Q99767 749 aa12.52□□□□□ -0.41
VPS50-201ENST00000251739 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.41
VPS50-201ENST00000251739 ZNFX1Q9P2E3 1918 aaKnown RBP12.51□□□□□ -0.41
VPS50-201ENST00000251739 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
VPS50-201ENST00000251739 IGHA2P01877 340 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 COL6A1P12109 1028 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
VPS50-201ENST00000251739 RGS2P41220 211 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 USP14P54578 494 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
VPS50-201ENST00000251739 PDE3AQ14432 1141 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 CCL14Q16627 93 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 DIEXFQ68CQ4 756 aaKnown RBP12.51□□□□□ -0.41
VPS50-201ENST00000251739 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 FEZ1Q99689 392 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 PFASO15067 1338 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 ZNF532Q9HCE3 1301 aa12.51□□□□□ -0.41
VPS50-201ENST00000251739 GOLIM4O00461 696 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 HOXC6P09630 235 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 MS4A1P11836 297 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 MAP2K5Q13163 448 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 SEPT2Q15019 361 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 ZYXQ15942 572 aaKnown RBP12.5□□□□□ -0.41
VPS50-201ENST00000251739 CLASRPQ8N2M8 674 aaKnown RBP12.5□□□□□ -0.41
VPS50-201ENST00000251739 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 GDF15Q99988 308 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
VPS50-201ENST00000251739 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
VPS50-201ENST00000251739 BTBD7Q9P203 1132 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 DDX19BQ9UMR2 479 aa12.5□□□□□ -0.41
VPS50-201ENST00000251739 LAMA2P24043 3122 aaKnown RBP12.5□□□□□ -0.41
VPS50-201ENST00000251739 LTBP2Q14767 1821 aa12.49□□□□□ -0.41
VPS50-201ENST00000251739 A0A1W2PRG0 241 aa12.49□□□□□ -0.41
VPS50-201ENST00000251739 HMMRO75330 724 aa12.49□□□□□ -0.41
VPS50-201ENST00000251739 SDR42E1Q8WUS8 393 aa12.49□□□□□ -0.41
VPS50-201ENST00000251739 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
VPS50-201ENST00000251739 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
VPS50-201ENST00000251739 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 SLC15A5A6NIM6 579 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 SOX1O00570 391 aaPredicted RBP12.48□□□□□ -0.41
VPS50-201ENST00000251739 RAB11FIP3O75154 756 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 CYP2D6P10635 497 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
VPS50-201ENST00000251739 BMP8BP34820 402 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 ADD2P35612 726 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 CCNA1P78396 465 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 GRB14Q14449 540 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 C7orf61Q8IZ16 206 aa12.48□□□□□ -0.41
VPS50-201ENST00000251739 SLC44A5Q8NCS7 719 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms