RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 UPF2Q9HAU5 1272 aaKnown RBP4.12□□□□□ -1.75
PHTF2-201ENST00000248550 ATG3Q9NT62 314 aa4.12□□□□□ -1.75
PHTF2-201ENST00000248550 PRR12Q9ULL5 1215 aa4.12□□□□□ -1.75
PHTF2-201ENST00000248550 ARFGEF1Q9Y6D6 1849 aa4.12□□□□□ -1.75
PHTF2-201ENST00000248550 CTNND1O60716 968 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 GBP2P32456 591 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 BMP8BP34820 402 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 NT5C2P49902 561 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 GNAQP50148 359 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CCT4P50991 539 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 RASA3Q14644 834 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TTLL4Q14679 1199 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 RAB3GAP1Q15042 981 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 IQCEQ6IPM2 695 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PDXDC1Q6P996 788 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CDAN1Q8IWY9 1227 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ZFPM1Q8IX07 1006 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 FAM161BQ96MY7 647 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CEP89Q96ST8 783 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 XPNPEP3Q9NQH7 507 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ZBTB1Q9Y2K1 713 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ARIH1Q9Y4X5 557 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PRMT3O60678 531 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ENTPD3O75355 529 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CALM1P0DP23 149 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CALM2P0DP24 149 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CALM3P0DP25 149 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 MATR3P43243 847 aaKnown RBP eCLIP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TNNT3P45378 269 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TRIM29Q14134 588 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CCDC85BQ15834 202 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 NFXL1Q6ZNB6 911 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 RASAL3Q86YV0 1011 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CLASRPQ8N2M8 674 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 EFCAB3Q8N7B9 438 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PGBD4Q96DM1 585 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 SPACA7Q96KW9 195 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 AMNQ9BXJ7 453 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ENTPD7Q9NQZ7 604 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PTPRCP08575 1304 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CEMIPQ8WUJ3 1361 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PLA2G5P39877 138 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 FKBP1AP62942 108 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ATCAYQ86WG3 371 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 LINC00116Q8NCU8 138 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ADAMTS19Q8TE59 1207 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TSHZ2Q9NRE2 1034 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 EHD2Q9NZN4 543 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 CHPF2Q9P2E5 772 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PRKAG3Q9UGI9 489 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 KCPQ6ZWJ8 1503 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 POLRMTO00411 1230 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 NFKBIAP25963 317 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 RGS19P49795 217 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TBC1D8BQ0IIM8 1120 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 MKRN4PQ13434 485 aaPredicted RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 ELOAQ14241 798 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 USH1GQ495M9 461 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 GNASQ5JWF2 1037 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 IQCA1Q86XH1 822 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TDRD5Q8NAT2 981 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PAWRQ96IZ0 340 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 RPS6KC1Q96S38 1066 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 NAP1L4Q99733 375 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 DZANK1Q9NVP4 752 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 PI4KBQ9UBF8 816 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 DBR1Q9UK59 544 aaKnown RBP4.11□□□□□ -1.75
PHTF2-201ENST00000248550 SHANK3Q9BYB0 1731 aa4.11□□□□□ -1.75
PHTF2-201ENST00000248550 TRIM6-TRIM34B2RNG4 842 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 TLR2O60603 784 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 BAG4O95429 457 aaKnown RBP4.1□□□□□ -1.75
PHTF2-201ENST00000248550 APOBRQ0VD83 1088 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 SLC39A6Q13433 755 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 PPP2R5BQ15173 497 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 FKBP1CQ5VVH2 108 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 SCYL3Q8IZE3 742 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 PGBD3Q8N328 593 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 ZNF280CQ8ND82 737 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 XAGE3Q8WTP9 111 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 AFG1LQ8WV93 481 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 RUNDC1Q96C34 613 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 TMEM169Q96HH4 297 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 TNNQ9UQP3 1299 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 PTCH2Q9Y6C5 1203 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 DENND3A2RUS2 1198 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 SMIM22K7EJ46 135 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 GFRA3O60609 400 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 ALDH1L1O75891 902 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 ATP2A2P16615 1042 aaKnown RBP4.1□□□□□ -1.75
PHTF2-201ENST00000248550 GNAT2P19087 354 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 MAN1A1P33908 653 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 MCAMP43121 646 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 TM4SF4P48230 202 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 GJD3Q8N144 294 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 MSL3Q8N5Y2 521 aaKnown RBP4.1□□□□□ -1.75
PHTF2-201ENST00000248550 CCDC150Q8NCX0 1101 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 FAM151AQ8WW52 585 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 ARMC5Q96C12 935 aa4.1□□□□□ -1.75
PHTF2-201ENST00000248550 TGS1Q96RS0 853 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms