RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 FBXO33Q7Z6M2 555 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 TRIML1Q8N9V2 468 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 GPKOWQ92917 476 aaPredicted RBP eCLIP29.07■■■□□ 2.24
RAB40C-201ENST00000248139 MAPK8IP1Q9UQF2 711 aa29.07■■■□□ 2.24
RAB40C-201ENST00000248139 PHLPP2Q6ZVD8 1323 aa29.06■■■□□ 2.24
RAB40C-201ENST00000248139 ZSCAN12O43309 604 aa29.06■■■□□ 2.24
RAB40C-201ENST00000248139 RPS8P62241 208 aaKnown RBP29.06■■■□□ 2.24
RAB40C-201ENST00000248139 CUL4BQ13620 913 aa29.06■■■□□ 2.24
RAB40C-201ENST00000248139 SH3RF1Q7Z6J0 888 aa29.06■■■□□ 2.24
RAB40C-201ENST00000248139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.06■■■□□ 2.244e-6■■■□□ 15.8
RAB40C-201ENST00000248139 SYNRGQ9UMZ2 1314 aa29.06■■■□□ 2.24
RAB40C-201ENST00000248139 TSPY2A6NKD2 308 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 RBL2Q08999 1139 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 MRPL44Q9H9J2 332 aaKnown RBP29.05■■■□□ 2.24
RAB40C-201ENST00000248139 RBM28Q9NW13 759 aaKnown RBP29.05■■■□□ 2.24
RAB40C-201ENST00000248139 CCP110O43303 1012 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 MYO1BO43795 1136 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 HIBADHP31937 336 aaKnown RBP29.05■■■□□ 2.24
RAB40C-201ENST00000248139 CCT6AP40227 531 aaKnown RBP29.05■■■□□ 2.24
RAB40C-201ENST00000248139 CLCN6P51797 869 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 FAM98CQ17RN3 349 aaKnown RBP29.05■■■□□ 2.24
RAB40C-201ENST00000248139 DYNLL2Q96FJ2 89 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 CDCA7Q9BWT1 371 aaPredicted RBP29.05■■■□□ 2.24
RAB40C-201ENST00000248139 BRMS1Q9HCU9 246 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 CTNND2Q9UQB3 1225 aa29.05■■■□□ 2.24
RAB40C-201ENST00000248139 ROBO1Q9Y6N7 1651 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 XDHP47989 1333 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 A0A1B0GTH6 734 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 PPP1R3GB7ZBB8 358 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 MNS1Q8NEH6 495 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 MTRQ99707 1265 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 MCM9Q9NXL9 1143 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 PPP2R5BQ15173 497 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 CLEC4GQ6UXB4 293 aa29.04■■■□□ 2.24
RAB40C-201ENST00000248139 STX10O60499 249 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 ERCC5P28715 1186 aaPredicted RBP29.03■■■□□ 2.24
RAB40C-201ENST00000248139 SPATA1Q5VX52 437 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 STAG2Q8N3U4 1231 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 UBXN4Q92575 508 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 LZTFL1Q9NQ48 299 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 FGRP09769 529 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 H2AFXP16104 143 aaPredicted RBP29.03■■■□□ 2.24
RAB40C-201ENST00000248139 FAM182BQ5T319 152 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 IGSF22Q8N9C0 903 aa29.03■■■□□ 2.24
RAB40C-201ENST00000248139 SCG2P13521 617 aa29.02■■■□□ 2.24
RAB40C-201ENST00000248139 AMIGO3Q86WK7 504 aa29.02■■■□□ 2.24
RAB40C-201ENST00000248139 CRNKL1Q9BZJ0 848 aaKnown RBP29.02■■■□□ 2.24
RAB40C-201ENST00000248139 RCSD1Q6JBY9 416 aa29.02■■■□□ 2.24
RAB40C-201ENST00000248139 DDAH1O94760 285 aa29.01■■■□□ 2.24
RAB40C-201ENST00000248139 ATP2C1P98194 919 aaPredicted RBP29.01■■■□□ 2.24
RAB40C-201ENST00000248139 RAD9BQ6WBX8 426 aa29.01■■■□□ 2.24
RAB40C-201ENST00000248139 FERMT2Q96AC1 680 aa29.01■■■□□ 2.24
RAB40C-201ENST00000248139 GPR101Q96P66 508 aaPredicted RBP29.01■■■□□ 2.24
RAB40C-201ENST00000248139 SPATA31A5Q5VU36 1347 aa29.01■■■□□ 2.23
RAB40C-201ENST00000248139 FAM205AQ6ZU69 1335 aa29.01■■■□□ 2.23
RAB40C-201ENST00000248139 SPATA31A7Q8IWB4 1347 aa29.01■■■□□ 2.23
RAB40C-201ENST00000248139 CASQ1P31415 396 aa29.01■■■□□ 2.23
RAB40C-201ENST00000248139 NBPF5PQ86XG9 351 aaPredicted RBP29.01■■■□□ 2.23
RAB40C-201ENST00000248139 AKR1B15C9JRZ8 316 aaPredicted RBP29■■■□□ 2.23
RAB40C-201ENST00000248139 CALM1P0DP23 149 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 CALM2P0DP24 149 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 CALM3P0DP25 149 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 PLIN2Q99541 437 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 WNK3Q9BYP7 1800 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 RASGRP2Q7LDG7 609 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 KRT222Q8N1A0 295 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 NLRP3Q96P20 1036 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 ZSWIM4Q9H7M6 989 aa29■■■□□ 2.23
RAB40C-201ENST00000248139 ADD3Q9UEY8 706 aaKnown RBP29■■■□□ 2.23
RAB40C-201ENST00000248139 THRAP3Q9Y2W1 955 aaKnown RBP29■■■□□ 2.23
RAB40C-201ENST00000248139 TFAP4Q01664 338 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 GRIK5Q16478 980 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 UTP14CQ5TAP6 766 aaKnown RBP28.99■■■□□ 2.23
RAB40C-201ENST00000248139 RRAGBQ5VZM2 374 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 TADA3O75528 432 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 SEC31AO94979 1220 aaKnown RBP28.99■■■□□ 2.23
RAB40C-201ENST00000248139 TYW1BQ6NUM6 668 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 FCHSD1Q86WN1 690 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 GTPBP4Q9BZE4 634 aaKnown RBP28.99■■■□□ 2.23
RAB40C-201ENST00000248139 VPS16Q9H269 839 aa28.99■■■□□ 2.23
RAB40C-201ENST00000248139 USP17L3A6NCW0 530 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 USP17L4A6NCW7 530 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 PP2D1A8MPX8 630 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 CASP14P31944 242 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 USP17L1Q7RTZ2 530 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 SLC44A5Q8NCS7 719 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 SMARCC1Q92922 1105 aaPredicted RBP28.98■■■□□ 2.23
RAB40C-201ENST00000248139 DIXDC1Q155Q3 683 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 E2F4Q16254 413 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 SETDB2Q96T68 719 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 CPVLQ9H3G5 476 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 IL17RBQ9NRM6 502 aa28.98■■■□□ 2.23
RAB40C-201ENST00000248139 GOLGB1Q14789 3259 aaKnown RBP28.98■■■□□ 2.23
RAB40C-201ENST00000248139 GSDMAQ96QA5 445 aa28.97■■■□□ 2.23
RAB40C-201ENST00000248139 RNF225M0QZC1 329 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-201ENST00000248139 ORC4O43929 436 aa28.97■■■□□ 2.23
RAB40C-201ENST00000248139 FXR1P51114 621 aaKnown RBP eCLIP28.97■■■□□ 2.23
RAB40C-201ENST00000248139 PFKFB3Q16875 520 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-201ENST00000248139 CDKAL1Q5VV42 579 aa28.97■■■□□ 2.23
RAB40C-201ENST00000248139 PPFIBP1Q86W92 1011 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms