RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 VPS54Q9P1Q0 977 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 ENTPD3O75355 529 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 MMP1P03956 469 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 TOP1P11387 765 aaKnown RBP20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 VEZTQ9HBM0 779 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 IGKV6D-41A0A0C4DH26 115 aa20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 LIG1P18858 919 aa20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 SHROOM1Q2M3G4 852 aaPredicted RBP20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 LRRC47Q8N1G4 583 aaKnown RBP20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 MAP3K14Q99558 947 aa20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 GREB1LQ9C091 1923 aaPredicted RBP20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 LTBP3Q9NS15 1303 aa20.73■□□□□ 0.91
KLHDC3-201ENST00000244670 NASPP49321 788 aaPredicted RBP20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 TNIP1Q15025 636 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 DIS3L2Q8IYB7 885 aaKnown RBP20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 CSRNP1Q96S65 589 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 MYH4Q9Y623 1939 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 GOLGA6L4A6NEF3 574 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 BTBD18B2RXH4 712 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 NOVP48745 357 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 SAFBQ15424 915 aaKnown RBP eCLIP20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 SPDYE2Q495Y8 402 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 CLIP2Q9UDT6 1046 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 RCOR1Q9UKL0 485 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 CLIC4Q9Y696 253 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 ATRNL1Q5VV63 1379 aa20.72■□□□□ 0.91
KLHDC3-201ENST00000244670 ATP2B2Q01814 1243 aa20.71■□□□□ 0.91
KLHDC3-201ENST00000244670 CERKLQ49MI3 558 aaPredicted RBP20.71■□□□□ 0.91
KLHDC3-201ENST00000244670 ATL3Q6DD88 541 aa20.71■□□□□ 0.91
KLHDC3-201ENST00000244670 USP17L2Q6R6M4 530 aa20.71■□□□□ 0.91
KLHDC3-201ENST00000244670 CPVLQ9H3G5 476 aa20.71■□□□□ 0.91
KLHDC3-201ENST00000244670 GJA3Q9Y6H8 435 aa20.71■□□□□ 0.91
KLHDC3-201ENST00000244670 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.91
KLHDC3-201ENST00000244670 U2AF2P26368 475 aaKnown RBP eCLIP20.7■□□□□ 0.911e-6■□□□□ 8.3
KLHDC3-201ENST00000244670 SLC35G1Q2M3R5 365 aa20.7■□□□□ 0.91
KLHDC3-201ENST00000244670 NBPF9Q3BBW0 867 aa20.7■□□□□ 0.91
KLHDC3-201ENST00000244670 OXER1Q8TDS5 423 aa20.7■□□□□ 0.91
KLHDC3-201ENST00000244670 FHDC1Q9C0D6 1143 aaPredicted RBP20.7■□□□□ 0.91
KLHDC3-201ENST00000244670 MYOZ2Q9NPC6 264 aa20.7■□□□□ 0.91
KLHDC3-201ENST00000244670 PALM3A6NDB9 673 aaPredicted RBP20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 USP17L5A8MUK1 530 aa20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 GDF11O95390 407 aa20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 TTLL1O95922 423 aa20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 PARP1P09874 1014 aaKnown RBP20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 XBP1P17861 261 aa20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 FOXP4Q8IVH2 680 aaPredicted RBP20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 TSPY26PQ9H489 355 aa20.7■□□□□ 0.9
KLHDC3-201ENST00000244670 WNT10BO00744 389 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 SCG2P13521 617 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 GNAQP50148 359 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 NR5A1Q13285 461 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 MTMR14Q8NCE2 650 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 CCDC17Q96LX7 622 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 RTEL1Q9NZ71 1219 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 CNTNAP1P78357 1384 aa20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
KLHDC3-201ENST00000244670 KLRF2D3W0D1 207 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 CYTH3O43739 400 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 EGFRP00533 1210 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 STK38Q15208 465 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 PFKFB3Q16875 520 aaPredicted RBP20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 TATDN1Q6P1N9 297 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 NOSTRINQ8IVI9 506 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 BICD2Q8TD16 824 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 PHF20Q9BVI0 1012 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 SCAF8Q9UPN6 1271 aaKnown RBP20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 FRMPD2Q68DX3 1309 aaPredicted RBP20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 MYO1BO43795 1136 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 GMPSP49915 693 aaPredicted RBP20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 CDAN1Q8IWY9 1227 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 FAM151AQ8WW52 585 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 GPKOWQ92917 476 aaPredicted RBP eCLIP20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 ZBED3Q96IU2 234 aaPredicted RBP20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 TMEM39BQ9GZU3 492 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 POLR3EQ9NVU0 708 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 SRCAPQ6ZRS2 3230 aa20.68■□□□□ 0.9
KLHDC3-201ENST00000244670 FZD9O00144 591 aa20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 PDHBP11177 359 aa20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 ANO1Q5XXA6 986 aa20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 ARHGAP27Q6ZUM4 889 aa20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 LINC00301Q8NCQ3 95 aa20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 FOXP1Q9H334 677 aaPredicted RBP20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 ZNF541Q9H0D2 1346 aa20.67■□□□□ 0.9
KLHDC3-201ENST00000244670 ME1P48163 572 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 METTL16Q86W50 562 aaKnown RBP20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 FAM43AQ8N2R8 423 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 DACT1Q9NYF0 836 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 NR1I2O75469 434 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 KRT2P35908 639 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 RRP1BQ14684 758 aaKnown RBP20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 SEPT2Q15019 361 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 SF3A1Q15459 793 aaKnown RBP20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 MICALL2Q8IY33 904 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 RNF214Q8ND24 703 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 FUCA2Q9BTY2 467 aa20.66■□□□□ 0.9
KLHDC3-201ENST00000244670 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms