RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 GPSM2P81274 684 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 GRIK5Q16478 980 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 ATP1A3P13637 1013 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 USP49Q70CQ1 688 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 RPGRQ92834 1020 aaKnown RBP25.02■■□□□ 1.6
RNF39-201ENST00000244360 NAV1Q8NEY1 1877 aa25.02■■□□□ 1.6
RNF39-201ENST00000244360 PSDA5PKW4 1024 aaPredicted RBP25.01■■□□□ 1.59
RNF39-201ENST00000244360 PRR29P0C7W0 189 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 GYS1P13807 737 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 CBX1P83916 185 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 MORC3Q14149 939 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 TMC6Q7Z403 805 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 IL17RBQ9NRM6 502 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 WNT7AO00755 349 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 LDHCP07864 332 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 SFPQP23246 707 aaKnown RBP eCLIP25.01■■□□□ 1.59
RNF39-201ENST00000244360 TFAP4Q01664 338 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 DIXDC1Q155Q3 683 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 CCDC178Q5BJE1 867 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 CERS3Q8IU89 383 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 SEPT12Q8IYM1 358 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 MLKLQ8NB16 471 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 TCP11L1Q9NUJ3 509 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 AFF2P51816 1311 aa25.01■■□□□ 1.59
RNF39-201ENST00000244360 ATP2B4P23634 1241 aa25■■□□□ 1.59
RNF39-201ENST00000244360 TRAPPC10P48553 1259 aa25■■□□□ 1.59
RNF39-201ENST00000244360 TTC38Q5R3I4 469 aa25■■□□□ 1.59
RNF39-201ENST00000244360 SMARCE1Q969G3 411 aa25■■□□□ 1.59
RNF39-201ENST00000244360 RTFDC1Q9BY42 306 aaPredicted RBP25■■□□□ 1.59
RNF39-201ENST00000244360 KAT14Q9H8E8 782 aa25■■□□□ 1.59
RNF39-201ENST00000244360 CBFA2T2O43439 604 aa25■■□□□ 1.59
RNF39-201ENST00000244360 NOM1Q5C9Z4 860 aaKnown RBP25■■□□□ 1.59
RNF39-201ENST00000244360 ARMCX5Q6P1M9 558 aa25■■□□□ 1.59
RNF39-201ENST00000244360 ERO1AQ96HE7 468 aa25■■□□□ 1.59
RNF39-201ENST00000244360 CCP110O43303 1012 aa24.99■■□□□ 1.59
RNF39-201ENST00000244360 IL1R1P14778 569 aa24.99■■□□□ 1.59
RNF39-201ENST00000244360 ATP2C1P98194 919 aaPredicted RBP24.99■■□□□ 1.59
RNF39-201ENST00000244360 DMTNQ08495 405 aa24.99■■□□□ 1.59
RNF39-201ENST00000244360 GTPBP4Q9BZE4 634 aaKnown RBP24.99■■□□□ 1.59
RNF39-201ENST00000244360 OGFRQ9NZT2 677 aa24.99■■□□□ 1.59
RNF39-201ENST00000244360 DACH1Q9UI36 760 aa24.99■■□□□ 1.59
RNF39-201ENST00000244360 ST5P78524 1137 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 MEX3CQ5U5Q3 659 aaKnown RBP24.98■■□□□ 1.59
RNF39-201ENST00000244360 SH3RF1Q7Z6J0 888 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 DYNLL2Q96FJ2 89 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 GPR101Q96P66 508 aaPredicted RBP24.98■■□□□ 1.59
RNF39-201ENST00000244360 CD209Q9NNX6 404 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 A0A087X0B3 334 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 GRM4Q14833 912 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 AMOTL1Q8IY63 956 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 PNMA1Q8ND90 353 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 SH3GLB2Q9NR46 395 aa24.98■■□□□ 1.59
RNF39-201ENST00000244360 DDX60LQ5H9U9 1706 aaKnown RBP24.98■■□□□ 1.59
RNF39-201ENST00000244360 UFL1O94874 794 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 SERPINB2P05120 415 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 ZSCAN20P17040 1043 aaPredicted RBP24.97■■□□□ 1.59
RNF39-201ENST00000244360 PDILTQ8N807 584 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 RBM17Q96I25 401 aaKnown RBP24.97■■□□□ 1.59
RNF39-201ENST00000244360 FANCLQ9NW38 375 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 TRMT1Q9NXH9 659 aaKnown RBP24.97■■□□□ 1.59
RNF39-201ENST00000244360 SLFN14P0C7P3 912 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 UBASH3AP57075 661 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 NLRP5P59047 1200 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 GRAMD1CQ8IYS0 662 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 DPF2Q92785 391 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 PODXL2Q9NZ53 605 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 GGA1Q9UJY5 639 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 PRDM4Q9UKN5 801 aa24.97■■□□□ 1.59
RNF39-201ENST00000244360 TRPC5Q9UL62 973 aaPredicted RBP24.97■■□□□ 1.59
RNF39-201ENST00000244360 CALML3P27482 149 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 HOXA10P31260 410 aaPredicted RBP24.96■■□□□ 1.59
RNF39-201ENST00000244360 SLC4A8Q2Y0W8 1093 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 SLC27A3Q5K4L6 730 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 ENOX1Q8TC92 643 aaKnown RBP24.96■■□□□ 1.59
RNF39-201ENST00000244360 TGFBRAP1Q8WUH2 860 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 SYMPKQ92797 1274 aaKnown RBP24.96■■□□□ 1.59
RNF39-201ENST00000244360 CCDC34Q96HJ3 373 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 EPSTI1Q96J88 318 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 VEGFAP15692 232 aaPredicted RBP24.96■■□□□ 1.59
RNF39-201ENST00000244360 ZNF174Q15697 407 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 MKNK2Q9HBH9 465 aa24.96■■□□□ 1.59
RNF39-201ENST00000244360 CDK5RAP2Q96SN8 1893 aa24.95■■□□□ 1.58
RNF39-201ENST00000244360 GPR75-ASB3A0A0A6YYF3 556 aa24.95■■□□□ 1.58
RNF39-201ENST00000244360 BBOX1O75936 387 aa24.95■■□□□ 1.58
RNF39-201ENST00000244360 SERPINC1P01008 464 aa24.95■■□□□ 1.58
RNF39-201ENST00000244360 ZNF18P17022 549 aa24.95■■□□□ 1.58
RNF39-201ENST00000244360 GNAQP50148 359 aa24.95■■□□□ 1.58
RNF39-201ENST00000244360 CT47A1Q5JQC4 288 aaPredicted RBP24.95■■□□□ 1.58
RNF39-201ENST00000244360 E4F1Q66K89 784 aaPredicted RBP24.95■■□□□ 1.58
RNF39-201ENST00000244360 SLU7O95391 586 aaKnown RBP24.94■■□□□ 1.58
RNF39-201ENST00000244360 FMR1Q06787 632 aaKnown RBP eCLIP24.94■■□□□ 1.58
RNF39-201ENST00000244360 PTGDRQ13258 359 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 VSTM4Q8IW00 320 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 ZNF397Q8NF99 534 aaPredicted RBP24.94■■□□□ 1.58
RNF39-201ENST00000244360 DHX58Q96C10 678 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 LRRC37AA6NMS7 1700 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 RASA1P20936 1047 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 PPP1R13BQ96KQ4 1090 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 MAD2L2Q9UI95 211 aa24.94■■□□□ 1.58
RNF39-201ENST00000244360 ZNF215Q9UL58 517 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms