RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SWAP70Q9UH65 585 aa26.7■■□□□ 1.86
MSX2-201ENST00000239243 MYO3BQ8WXR4 1341 aa26.69■■□□□ 1.86
MSX2-201ENST00000239243 TOP1P11387 765 aaKnown RBP26.69■■□□□ 1.86
MSX2-201ENST00000239243 CEP57L1Q8IYX8 460 aa26.69■■□□□ 1.86
MSX2-201ENST00000239243 FBXO2Q9UK22 296 aaPredicted RBP26.69■■□□□ 1.86
MSX2-201ENST00000239243 HDLBPQ00341 1268 aaKnown RBP26.69■■□□□ 1.86
MSX2-201ENST00000239243 SUPT20HQ8NEM7 779 aa26.69■■□□□ 1.86
MSX2-201ENST00000239243 CLIC6Q96NY7 704 aa26.69■■□□□ 1.86
MSX2-201ENST00000239243 SRPRBQ9Y5M8 271 aaKnown RBP26.69■■□□□ 1.86
MSX2-201ENST00000239243 PALM3A6NDB9 673 aaPredicted RBP26.68■■□□□ 1.86
MSX2-201ENST00000239243 GOLGA6L19H0YKK7 550 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 CHRNA5P30532 468 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 NOVP48745 357 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 SCNN1DP51172 638 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 GABPAQ06546 454 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 NPY5RQ15761 445 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 TNFRSF25Q93038 417 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 MXD3Q9BW11 206 aa26.68■■□□□ 1.86
MSX2-201ENST00000239243 ECE2O60344 883 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 TRAPPC10P48553 1259 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 STAG2Q8N3U4 1231 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 ZDHHC15Q96MV8 337 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 KCNH3Q9ULD8 1083 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 CRKP46108 304 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 CDC42EP5Q6NZY7 148 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 ELOA2Q8IYF1 753 aaPredicted RBP26.67■■□□□ 1.86
MSX2-201ENST00000239243 OSBPL5Q9H0X9 879 aaPredicted RBP26.67■■□□□ 1.86
MSX2-201ENST00000239243 ZKSCAN5Q9Y2L8 839 aa26.67■■□□□ 1.86
MSX2-201ENST00000239243 GRIPAP1Q4V328 841 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 APOBEC3HQ6NTF7 200 aaKnown RBP26.66■■□□□ 1.86
MSX2-201ENST00000239243 CCDC148Q8NFR7 591 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 C7orf43Q8WVR3 580 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 SERPINB13Q9UIV8 391 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 HLA-DOAP06340 250 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 SMARCA1P28370 1054 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 SF3B2Q13435 895 aaKnown RBP26.66■■□□□ 1.86
MSX2-201ENST00000239243 IQCB1Q15051 598 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 C11orf57Q6ZUT1 292 aaPredicted RBP26.66■■□□□ 1.86
MSX2-201ENST00000239243 CEP95Q96GE4 821 aa26.66■■□□□ 1.86
MSX2-201ENST00000239243 DDX4Q9NQI0 724 aaKnown RBP26.66■■□□□ 1.86
MSX2-201ENST00000239243 HOOK1Q9UJC3 728 aaKnown RBP26.66■■□□□ 1.86
MSX2-201ENST00000239243 PARP1P09874 1014 aaKnown RBP26.65■■□□□ 1.86
MSX2-201ENST00000239243 DACT2Q5SW24 774 aa26.65■■□□□ 1.86
MSX2-201ENST00000239243 GALNT17Q6IS24 598 aa26.65■■□□□ 1.86
MSX2-201ENST00000239243 SPZ1Q9BXG8 430 aa26.65■■□□□ 1.86
MSX2-201ENST00000239243 MYH8P13535 1937 aa26.65■■□□□ 1.86
MSX2-201ENST00000239243 ATP2B1P20020 1258 aa26.65■■□□□ 1.86
MSX2-201ENST00000239243 BAG6P46379 1132 aa26.65■■□□□ 1.86
MSX2-201ENST00000239243 C10orf71Q711Q0 1435 aa26.64■■□□□ 1.86
MSX2-201ENST00000239243 BECN2A8MW95 431 aa26.64■■□□□ 1.86
MSX2-201ENST00000239243 GOLGA6L6A8MZA4 724 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 KLRF2D3W0D1 207 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 AP5Z1O43299 807 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 KIAA2012Q0VF49 1180 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 PIBF1Q8WXW3 757 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 FERMT2Q96AC1 680 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 ZNF219Q9P2Y4 722 aaPredicted RBP26.63■■□□□ 1.85
MSX2-201ENST00000239243 EARS2Q5JPH6 523 aaKnown RBP26.63■■□□□ 1.85
MSX2-201ENST00000239243 TTC38Q5R3I4 469 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 KRBA2Q6ZNG9 492 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 CNNM3Q8NE01 707 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 BPIFA3Q9BQP9 254 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 EHD4Q9H223 541 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 PCDHA4Q9UN74 947 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 ADAMTSL1Q8N6G6 1762 aa26.63■■□□□ 1.85
MSX2-201ENST00000239243 FAM205CA6NFA0 338 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 BLIDQ8IZY5 108 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 BAZ2BQ9UIF8 2168 aaKnown RBP26.62■■□□□ 1.85
MSX2-201ENST00000239243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.62■■□□□ 1.85
MSX2-201ENST00000239243 TPM3P06753 285 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 NLRP12P59046 1061 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 PPP4R3BQ5MIZ7 849 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 KIAA0825Q8IV33 1275 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 MTMR4Q9NYA4 1195 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 TUBE1Q9UJT0 475 aa26.62■■□□□ 1.85
MSX2-201ENST00000239243 DAGLBQ8NCG7 672 aa26.61■■□□□ 1.85
MSX2-201ENST00000239243 CCDC12Q8WUD4 166 aaPredicted RBP26.61■■□□□ 1.85
MSX2-201ENST00000239243 ERCC4Q92889 916 aaPredicted RBP26.61■■□□□ 1.85
MSX2-201ENST00000239243 DHX36Q9H2U1 1008 aaKnown RBP26.61■■□□□ 1.85
MSX2-201ENST00000239243 BARHL2Q9NY43 387 aa26.61■■□□□ 1.85
MSX2-201ENST00000239243 SERPINA10Q9UK55 444 aa26.61■■□□□ 1.85
MSX2-201ENST00000239243 MTMR7Q9Y216 660 aa26.61■■□□□ 1.85
MSX2-201ENST00000239243 ZNF646O15015 1829 aaPredicted RBP26.61■■□□□ 1.85
MSX2-201ENST00000239243 CYTH3O43739 400 aa26.61■■□□□ 1.85
MSX2-201ENST00000239243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.61■■□□□ 1.85
MSX2-201ENST00000239243 KCNQ5Q9NR82 932 aa26.61■■□□□ 1.85
MSX2-201ENST00000239243 SCN9AQ15858 1988 aa26.6■■□□□ 1.85
MSX2-201ENST00000239243 AOC3Q16853 763 aa26.6■■□□□ 1.85
MSX2-201ENST00000239243 SARM1Q6SZW1 724 aa26.6■■□□□ 1.85
MSX2-201ENST00000239243 PIK3AP1Q6ZUJ8 805 aa26.6■■□□□ 1.85
MSX2-201ENST00000239243 CCDC34Q96HJ3 373 aa26.6■■□□□ 1.85
MSX2-201ENST00000239243 IGKV6D-41A0A0C4DH26 115 aa26.59■■□□□ 1.85
MSX2-201ENST00000239243 NPM3O75607 178 aaKnown RBP26.59■■□□□ 1.85
MSX2-201ENST00000239243 KANK3Q6NY19 840 aa26.59■■□□□ 1.85
MSX2-201ENST00000239243 GPKOWQ92917 476 aaPredicted RBP eCLIP26.59■■□□□ 1.85
MSX2-201ENST00000239243 TRIM5Q9C035 493 aa26.59■■□□□ 1.85
MSX2-201ENST00000239243 LONRF3Q496Y0 759 aa26.59■■□□□ 1.85
MSX2-201ENST00000239243 AKR1B1P15121 316 aa26.58■■□□□ 1.85
MSX2-201ENST00000239243 VEGFAP15692 232 aaPredicted RBP26.58■■□□□ 1.85
MSX2-201ENST00000239243 WWC2Q6AWC2 1192 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms