RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 FAM71BQ8TC56 605 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 RSPH14Q9UHP6 348 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 PHACTR2O75167 634 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 TDO2P48775 406 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 RCAN1P53805 252 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 HLFQ16534 295 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 HSP90B2PQ58FF3 399 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
DDX55-201ENST00000238146 HELBQ8NG08 1087 aaPredicted RBP17.55■□□□□ 0.4
DDX55-201ENST00000238146 ZFP91Q96JP5 570 aaPredicted RBP17.55■□□□□ 0.4
DDX55-201ENST00000238146 SLF1Q9BQI6 1058 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 VPS16Q9H269 839 aa17.55■□□□□ 0.4
DDX55-201ENST00000238146 WDR93Q6P2C0 686 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
DDX55-201ENST00000238146 RNF26Q9BY78 433 aaPredicted RBP17.54■□□□□ 0.4
DDX55-201ENST00000238146 BCL9LQ86UU0 1499 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 TIAM2Q8IVF5 1701 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 CHD4Q14839 1912 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 RASGRF1Q13972 1273 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 PKN1Q16512 942 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 LCORLQ8N3X6 602 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 LPIN2Q92539 896 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
DDX55-201ENST00000238146 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
DDX55-201ENST00000238146 FGFR2P21802 821 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 COPB1P53618 953 aaKnown RBP17.53■□□□□ 0.4
DDX55-201ENST00000238146 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
DDX55-201ENST00000238146 DNAJC10Q8IXB1 793 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 SLC4A4Q9Y6R1 1079 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 MYH8P13535 1937 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 ZNF142P52746 1687 aaPredicted RBP17.53■□□□□ 0.4
DDX55-201ENST00000238146 KRT9P35527 623 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 NACAP1Q9BZK3 213 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 BLZF1Q9H2G9 400 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 TAB2Q9NYJ8 693 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 XDHP47989 1333 aa17.53■□□□□ 0.4
DDX55-201ENST00000238146 KRT2P35908 639 aa17.52■□□□□ 0.4
DDX55-201ENST00000238146 RRAGBQ5VZM2 374 aa17.52■□□□□ 0.4
DDX55-201ENST00000238146 CHP1Q99653 195 aa17.52■□□□□ 0.4
DDX55-201ENST00000238146 MED4Q9NPJ6 270 aa17.52■□□□□ 0.4
DDX55-201ENST00000238146 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
DDX55-201ENST00000238146 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.39
DDX55-201ENST00000238146 PRDM1O75626 825 aa17.52■□□□□ 0.39
DDX55-201ENST00000238146 XBP1P17861 261 aa17.52■□□□□ 0.39
DDX55-201ENST00000238146 TNNT3P45378 269 aaPredicted RBP17.52■□□□□ 0.39
DDX55-201ENST00000238146 AKAP17AQ02040 695 aaKnown RBP17.52■□□□□ 0.39
DDX55-201ENST00000238146 ZNF174Q15697 407 aa17.52■□□□□ 0.39
DDX55-201ENST00000238146 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.39
DDX55-201ENST00000238146 TRIM10Q9UDY6 481 aa17.52■□□□□ 0.39
DDX55-201ENST00000238146 SNAP23O00161 211 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 NOM1Q5C9Z4 860 aaKnown RBP17.51■□□□□ 0.39
DDX55-201ENST00000238146 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 RWDD2AQ9UIY3 292 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 EPN1Q9Y6I3 576 aaPredicted RBP17.51■□□□□ 0.39
DDX55-201ENST00000238146 BMP15O95972 392 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 SPAG1Q07617 926 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 FUT2Q10981 343 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 TRIM14Q14142 442 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 SEC23AQ15436 765 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 E2F4Q16254 413 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 TCP11X2Q5H9J9 407 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 LRRC31Q6UY01 552 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 TRAPPC11Q7Z392 1133 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 ACBD3Q9H3P7 528 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 FAM204AQ9H8W3 233 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
DDX55-201ENST00000238146 NDUFA10O95299 355 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 GNAT2P19087 354 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 CCDC148Q8NFR7 591 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 MTRQ99707 1265 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
DDX55-201ENST00000238146 TNKSO95271 1327 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 KCNJ18B7U540 433 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 ATF3P18847 181 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 USP14P54578 494 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 PAK1Q13153 545 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 KCNJ12Q14500 433 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 VIPAS39Q9H9C1 493 aa17.5■□□□□ 0.39
DDX55-201ENST00000238146 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
DDX55-201ENST00000238146 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
DDX55-201ENST00000238146 PTGDRQ13258 359 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 MIGA1Q8NAN2 632 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 IPO4Q8TEX9 1081 aaKnown RBP17.49■□□□□ 0.39
DDX55-201ENST00000238146 HDAC6Q9UBN7 1215 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 V9GY48 417 aaPredicted RBP17.49■□□□□ 0.39
DDX55-201ENST00000238146 PSMD14O00487 310 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 ENC1O14682 589 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 SYF2O95926 243 aaKnown RBP17.49■□□□□ 0.39
DDX55-201ENST00000238146 AARSP49588 968 aaKnown RBP eCLIP17.49■□□□□ 0.39
DDX55-201ENST00000238146 ATP2C1P98194 919 aaPredicted RBP17.49■□□□□ 0.39
DDX55-201ENST00000238146 PPARAQ07869 468 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 NELFBQ8WX92 580 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 TNFRSF25Q93038 417 aa17.49■□□□□ 0.39
DDX55-201ENST00000238146 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms