RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 A0A087X0B3 334 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 KIFC2Q96AC6 838 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 ARGLU1Q9NWB6 273 aaPredicted RBP17.69■□□□□ 0.42
CTSD-201ENST00000236671 RTL9Q8NET4 1388 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 TNKSO95271 1327 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 CASQ1P31415 396 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 DDR1Q08345 913 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 NFIXQ14938 502 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 PKN1Q16512 942 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
CTSD-201ENST00000236671 TRIM75PA6NK02 468 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 PLA2G4AP47712 749 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 FUT2Q10981 343 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 EARS2Q5JPH6 523 aaKnown RBP17.68■□□□□ 0.42
CTSD-201ENST00000236671 TMCO3Q6UWJ1 677 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 SH3RF1Q7Z6J0 888 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 SDR42E1Q8WUS8 393 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 DHX58Q96C10 678 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 LRP2BPQ9P2M1 347 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 MRFAP1Q9Y605 127 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 MYH6P13533 1939 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 MMP10P09238 476 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 TPM1P09493 284 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
CTSD-201ENST00000236671 ESR2Q92731 530 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 DESI2Q9BSY9 194 aa17.68■□□□□ 0.42
CTSD-201ENST00000236671 NIP7Q9Y221 180 aaKnown RBP eCLIP17.68■□□□□ 0.424e-13■□□□□ 10.1
CTSD-201ENST00000236671 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 CD44P16070 742 aaKnown RBP17.67■□□□□ 0.42
CTSD-201ENST00000236671 CYP7A1P22680 504 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 CUL4BQ13620 913 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 EPSTI1Q96J88 318 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 PHF20Q9BVI0 1012 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 DUOX1Q9NRD9 1551 aa17.67■□□□□ 0.42
CTSD-201ENST00000236671 MINDY4BA8MYZ0 360 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 KRT2P35908 639 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 FAM193AP78312 1265 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 MTF1Q14872 753 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
CTSD-201ENST00000236671 FLAD1Q8NFF5 587 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 PANX2Q96RD6 677 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 MRPL44Q9H9J2 332 aaKnown RBP17.66■□□□□ 0.42
CTSD-201ENST00000236671 SYNRGQ9UMZ2 1314 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 AKR1B15C9JRZ8 316 aaPredicted RBP17.66■□□□□ 0.42
CTSD-201ENST00000236671 WNT7AO00755 349 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 TEX33O43247 280 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
CTSD-201ENST00000236671 PPP2R3AQ06190 1150 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 SPATA1Q5VX52 437 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
CTSD-201ENST00000236671 SYMPKQ92797 1274 aaKnown RBP17.66■□□□□ 0.42
CTSD-201ENST00000236671 PAGE5Q96GU1 130 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 COL4A1P02462 1669 aa17.66■□□□□ 0.42
CTSD-201ENST00000236671 LAMB2P55268 1798 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 PRDM1O75626 825 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 XBP1P17861 261 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 PBX1P40424 430 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 AFMP43652 599 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
CTSD-201ENST00000236671 CHRNDQ07001 517 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 CDKAL1Q5VV42 579 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 ZSCAN10Q96SZ4 725 aaPredicted RBP17.65■□□□□ 0.42
CTSD-201ENST00000236671 EPC1Q9H2F5 836 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 MAGEB6P1A0A0J9YX57 407 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 SOWAHDA6NJG2 315 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 PRPF3O43395 683 aaKnown RBP17.65■□□□□ 0.42
CTSD-201ENST00000236671 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 CASP1P29466 404 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 PTGER2P43116 358 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 DPYDQ12882 1025 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
CTSD-201ENST00000236671 CREBRFQ8IUR6 639 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
CTSD-201ENST00000236671 RIOK1Q9BRS2 568 aaKnown RBP17.65■□□□□ 0.42
CTSD-201ENST00000236671 COL1A1P02452 1464 aaPredicted RBP17.64■□□□□ 0.42
CTSD-201ENST00000236671 ZNF804BA4D1E1 1349 aa17.64■□□□□ 0.42
CTSD-201ENST00000236671 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
CTSD-201ENST00000236671 SEC31AO94979 1220 aaKnown RBP17.64■□□□□ 0.41
CTSD-201ENST00000236671 CCDC175P0C221 793 aa17.64■□□□□ 0.41
CTSD-201ENST00000236671 KLHL10Q6JEL2 608 aa17.64■□□□□ 0.41
CTSD-201ENST00000236671 GPR161Q8N6U8 529 aaKnown RBP17.64■□□□□ 0.41
CTSD-201ENST00000236671 TNFRSF25Q93038 417 aa17.64■□□□□ 0.41
CTSD-201ENST00000236671 FERMT2Q96AC1 680 aa17.64■□□□□ 0.41
CTSD-201ENST00000236671 MTFR1LQ9H019 292 aa17.64■□□□□ 0.41
CTSD-201ENST00000236671 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
CTSD-201ENST00000236671 IQSEC3Q9UPP2 1182 aaPredicted RBP17.64■□□□□ 0.41
CTSD-201ENST00000236671 PPP1R3GB7ZBB8 358 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 POLRMTO00411 1230 aaKnown RBP17.63■□□□□ 0.41
CTSD-201ENST00000236671 NTSR2O95665 410 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 TM4SF1P30408 202 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 STX17P56962 302 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 RBL2Q08999 1139 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 PARP10Q53GL7 1025 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 CACNA1SQ13698 1873 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 BMP15O95972 392 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms