RNA–Protein interactions for RNA: ENST00000234310.7

PPP3R1-201, Transcript of protein phosphatase 3 regulatory subunit B, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP3R1, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3R1-201ENST00000234310 SMARCE1Q969G3 411 aa16.08■□□□□ 0.16
PPP3R1-201ENST00000234310 BLZF1Q9H2G9 400 aa16.08■□□□□ 0.16
PPP3R1-201ENST00000234310 PDCL3Q9H2J4 239 aa16.08■□□□□ 0.16
PPP3R1-201ENST00000234310 RBM28Q9NW13 759 aaKnown RBP16.08■□□□□ 0.16
PPP3R1-201ENST00000234310 SCG2P13521 617 aa16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 MEX3CQ5U5Q3 659 aaKnown RBP16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 NFE2L3Q9Y4A8 694 aa16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 SEPT12Q8IYM1 358 aa16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
PPP3R1-201ENST00000234310 XBP1P17861 261 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 SFPQP23246 707 aaKnown RBP eCLIP16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 TPM4P67936 248 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 MORC3Q14149 939 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 NYAP1Q6ZVC0 841 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 CYTH3O43739 400 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 GYS1P13807 737 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 MKNK2Q9HBH9 465 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 LY75O60449 1722 aa16.06■□□□□ 0.16
PPP3R1-201ENST00000234310 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 DPYDQ12882 1025 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 SBK1Q52WX2 424 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 XDHP47989 1333 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 PTPN14Q15678 1187 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 RTFDC1Q9BY42 306 aaPredicted RBP16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 POLLQ9UGP5 575 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 AFF2P51816 1311 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 CALM1P0DP23 149 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 CALM2P0DP24 149 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 CALM3P0DP25 149 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 BTDP43251 543 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 ZNF579Q8NAF0 562 aaKnown RBP16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 PPP1R13BQ96KQ4 1090 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 MXD3Q9BW11 206 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 CD209Q9NNX6 404 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
PPP3R1-201ENST00000234310 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 SERPINB2P05120 415 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 TSPY3P0CV98 308 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 TSPY8P0CW00 308 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 GSDMDP57764 484 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 DDR1Q08345 913 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 MTRQ99707 1265 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 IMPACTQ9P2X3 320 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 CLEC10AQ8IUN9 316 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 LRRN4CLQ8ND94 238 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 PLIN2Q99541 437 aa16.04■□□□□ 0.16
PPP3R1-201ENST00000234310 NEMFO60524 1076 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 NCBP1Q09161 790 aaKnown RBP16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 PPP2R5BQ15173 497 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 VSTM4Q8IW00 320 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 SPTY2D1Q68D10 685 aaPredicted RBP16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 ZNF804AQ7Z570 1209 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 RASA1P20936 1047 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 ATP2C1P98194 919 aaPredicted RBP16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 WWC2Q6AWC2 1192 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 HEATR3Q7Z4Q2 680 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 BRMS1Q9HCU9 246 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 MAPK8IP1Q9UQF2 711 aa16.03■□□□□ 0.16
PPP3R1-201ENST00000234310 FANCGO15287 622 aa16.02■□□□□ 0.16
PPP3R1-201ENST00000234310 TEX33O43247 280 aa16.02■□□□□ 0.16
PPP3R1-201ENST00000234310 CTIFO43310 598 aaKnown RBP16.02■□□□□ 0.16
PPP3R1-201ENST00000234310 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.16
PPP3R1-201ENST00000234310 TRIM37O94972 964 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 ZNF18P17022 549 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 SYT10Q6XYQ8 523 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 HOMER1Q86YM7 354 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 CDK5RAP2Q96SN8 1893 aa16.02■□□□□ 0.15
PPP3R1-201ENST00000234310 SLFN14P0C7P3 912 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 CUL4BQ13620 913 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 USP17L2Q6R6M4 530 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 SPATA20Q8TB22 786 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 TMEM60Q9H2L4 133 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 VAT1LQ9HCJ6 419 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 NAV1Q8NEY1 1877 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 INF2Q27J81 1249 aa16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 FAM177A1Q8N128 213 aaPredicted RBP16.01■□□□□ 0.15
PPP3R1-201ENST00000234310 ZNF215Q9UL58 517 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms