RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 COL9A1P20849 921 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PRDX5P30044 214 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 OAZ1P54368 228 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 NKX3-2P78367 333 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PTPN11Q06124 597 aaPredicted RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 LRRC26Q2I0M4 334 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 TMEM179Q6ZVK1 233 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 MRPL50Q8N5N7 158 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 SLC44A5Q8NCS7 719 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PHOSPHO2Q8TCD6 241 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 CRNKL1Q9BZJ0 848 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 JAG2Q9Y219 1238 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 CTDP1Q9Y5B0 961 aaPredicted RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PCDHA11Q9Y5I1 949 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PCDHAC2Q9Y5I4 1007 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 DDX10Q13206 875 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PICALMQ13492 652 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 MTMR2Q13614 643 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 ABCB5Q2M3G0 1257 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 LRRC24Q50LG9 513 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 MFSD5Q6N075 450 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 NSUN4Q96CB9 384 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 DDX60LQ5H9U9 1706 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 AOX1Q06278 1338 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 FSD2A1L4K1 749 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 ALADP13716 330 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 CNGA1P29973 690 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 TMEM31Q5JXX7 168 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 ZSCAN25Q6NSZ9 544 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 CDAN1Q8IWY9 1227 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 SAMD11Q96NU1 681 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 ASB2Q96Q27 587 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 SLC9A7Q96T83 725 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 PAGR1Q9BTK6 254 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 USP44Q9H0E7 712 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 MRS2Q9HD23 443 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 XPNPEP3Q9NQH7 507 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 TMEM39AQ9NV64 488 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 IQSEC3Q9UPP2 1182 aaPredicted RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 RAD50Q92878 1312 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 DDTLA6NHG4 134 aaPredicted RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 F6X3S4 739 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 DUSP11O75319 330 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 TIMP1P01033 207 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 MECOMQ03112 1051 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 RASGRF1Q13972 1273 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 TREML2Q5T2D2 321 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 WDR78Q5VTH9 848 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 ATG9AQ7Z3C6 839 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 UHRF1Q96T88 793 aaPredicted RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 UPF3BQ9BZI7 483 aaKnown RBP2.78□□□□□ -1.96
PRKD3-201ENST00000234179 CTNNA3Q9UI47 895 aa2.78□□□□□ -1.96
PRKD3-201ENST00000234179 ZNF316A6NFI3 1004 aaPredicted RBP2.78□□□□□ -1.97
PRKD3-201ENST00000234179 ASB14A6NK59 587 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 ERC2O15083 957 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 IGHA2P01877 340 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 NBPF7P0C2Y1 421 aaPredicted RBP2.78□□□□□ -1.97
PRKD3-201ENST00000234179 SYN1P17600 705 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 USP5P45974 858 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 MDM2Q00987 491 aaPredicted RBP2.78□□□□□ -1.97
PRKD3-201ENST00000234179 TLE2Q04725 743 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 LRRC41Q15345 812 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 CERKLQ49MI3 558 aaPredicted RBP2.78□□□□□ -1.97
PRKD3-201ENST00000234179 TTC39AQ5SRH9 613 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 RASIP1Q5U651 963 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 RIOX2Q8IUF8 465 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 CHST13Q8NET6 341 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 XAGE2Q96GT9 111 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 KAZALD1Q96I82 304 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 SPATC1LQ9H0A9 340 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 UPF3AQ9H1J1 476 aaKnown RBP2.78□□□□□ -1.97
PRKD3-201ENST00000234179 SLC28A3Q9HAS3 691 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 IL23AQ9NPF7 189 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 PRDM5Q9NQX1 630 aaPredicted RBP2.78□□□□□ -1.97
PRKD3-201ENST00000234179 STARD7Q9NQZ5 370 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 POLR3EQ9NVU0 708 aa2.78□□□□□ -1.97
PRKD3-201ENST00000234179 A0A1B0GUL7 405 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 GNAI2P04899 355 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 DNAJB2P25686 324 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 PHKA1P46020 1223 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 RCSD1Q6JBY9 416 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 SH3BP5LQ7L8J4 393 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 TICAM2Q86XR7 235 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF576Q9H609 170 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 GOPCQ9HD26 462 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 SNAP23O00161 211 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ATP2A1O14983 1001 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 BAIAP3O94812 1187 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ADAMTS19Q8TE59 1207 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 HMG20BQ9P0W2 317 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 MAST2Q6P0Q8 1798 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 FLT1P17948 1338 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 NKRFO15226 690 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRKD3-201ENST00000234179 GPR37L1O60883 481 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 ZBED4O75132 1171 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 SHHQ15465 462 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 MAMDC4Q6UXC1 1216 aa2.77□□□□□ -1.97
PRKD3-201ENST00000234179 Q7L0L9 218 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms