RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 TRIM31Q9BZY9 425 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 PSMA7O14818 248 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 GCP02774 474 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 EZRP15311 586 aaKnown RBP16.28■□□□□ 0.2
PRDM4-201ENST00000228437 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
PRDM4-201ENST00000228437 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 SCARF1Q14162 830 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 CSGALNACT2Q8N6G5 542 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 CABS1Q96KC9 395 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
PRDM4-201ENST00000228437 KRT2P35908 639 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 ASIC1P78348 528 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 ABHD10Q9NUJ1 306 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 B4DLN1 442 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 CATIPQ7Z7H3 387 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 KIRREL3Q8IZU9 778 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 CHD1O14646 1710 aa16.27■□□□□ 0.2
PRDM4-201ENST00000228437 COL15A1P39059 1388 aa16.27■□□□□ 0.19
PRDM4-201ENST00000228437 UBLCP1Q8WVY7 318 aaPredicted RBP16.27■□□□□ 0.19
PRDM4-201ENST00000228437 N4BP2L2Q92802 583 aaPredicted RBP16.27■□□□□ 0.19
PRDM4-201ENST00000228437 NOC4LQ9BVI4 516 aaKnown RBP16.27■□□□□ 0.19
PRDM4-201ENST00000228437 HNRNPH1P31943 449 aaKnown RBP16.27■□□□□ 0.19
PRDM4-201ENST00000228437 KCTD19Q17RG1 926 aaPredicted RBP16.27■□□□□ 0.19
PRDM4-201ENST00000228437 COG1Q8WTW3 980 aa16.27■□□□□ 0.19
PRDM4-201ENST00000228437 FAM53CQ9NYF3 392 aa16.27■□□□□ 0.19
PRDM4-201ENST00000228437 CCDC194A0A1B0GVG4 234 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 BMP6P22004 513 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 IRAK1P51617 712 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 USP14P54578 494 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 GUCY2DQ02846 1103 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 RPAINQ86UA6 219 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 EXOC5O00471 708 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 NLRC4Q9NPP4 1024 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
PRDM4-201ENST00000228437 SNAP23O00161 211 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 DEXIO95424 95 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 ANTXR2P58335 489 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 GUCY1A3Q02108 690 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 NR1I3Q14994 352 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
PRDM4-201ENST00000228437 SEPT11Q9NVA2 429 aaKnown RBP16.26■□□□□ 0.19
PRDM4-201ENST00000228437 EHD2Q9NZN4 543 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 HPS5Q9UPZ3 1129 aa16.26■□□□□ 0.19
PRDM4-201ENST00000228437 ERCC5P28715 1186 aaPredicted RBP16.25■□□□□ 0.19
PRDM4-201ENST00000228437 PTGDRQ13258 359 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 NNTQ13423 1086 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 TACO1Q9BSH4 297 aaKnown RBP16.25■□□□□ 0.19
PRDM4-201ENST00000228437 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 CD248Q9HCU0 757 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 HPCAL4Q9UM19 191 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 EIF4E1BA6NMX2 242 aaKnown RBP16.25■□□□□ 0.19
PRDM4-201ENST00000228437 MAP2K7O14733 419 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 GYPCP04921 128 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 MAGEA1P43355 309 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 PAGE5Q96GU1 130 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 SELENOSQ9BQE4 189 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 ZSWIM5Q9P217 1185 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 ALKQ9UM73 1620 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 TTC26A0AVF1 554 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 MOCS3O95396 460 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
PRDM4-201ENST00000228437 MB21D2Q8IYB1 491 aaPredicted RBP16.25■□□□□ 0.19
PRDM4-201ENST00000228437 DYDC1Q8WWB3 177 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 TMEM87BQ96K49 555 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
PRDM4-201ENST00000228437 PRKAB2O43741 272 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 IQCA1Q86XH1 822 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 RRP36Q96EU6 259 aaKnown RBP16.24■□□□□ 0.19
PRDM4-201ENST00000228437 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
PRDM4-201ENST00000228437 NCK2O43639 380 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 KRT14P02533 472 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 PTPREP23469 700 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 SEC24CP53992 1094 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 ERVK-24P63145 666 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
PRDM4-201ENST00000228437 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 CCDC51Q96ER9 411 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 EPB41L5Q9HCM4 733 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 EXOC1Q9NV70 894 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 DUSP10Q9Y6W6 482 aa16.24■□□□□ 0.19
PRDM4-201ENST00000228437 ANKRD18BA2A2Z9 1011 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
PRDM4-201ENST00000228437 PROCA1Q8NCQ7 364 aaPredicted RBP16.23■□□□□ 0.19
PRDM4-201ENST00000228437 KRT23Q9C075 422 aa16.23■□□□□ 0.19
PRDM4-201ENST00000228437 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms