RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 C10orf71Q711Q0 1435 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 CICQ96RK0 1608 aaPredicted RBP9.31□□□□□ -0.92
CCL1-201ENST00000225842 ITSN1Q15811 1721 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 RGS19P49795 217 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
CCL1-201ENST00000225842 TGFB2P61812 414 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 GPLD1P80108 840 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 RASA3Q14644 834 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 SMIM5Q71RC9 77 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 TRIM22Q8IYM9 498 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 FAM169BQ8N8A8 192 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 RNPC3Q96LT9 517 aaKnown RBP9.31□□□□□ -0.92
CCL1-201ENST00000225842 POP1Q99575 1024 aaKnown RBP9.31□□□□□ -0.92
CCL1-201ENST00000225842 RNF181Q9P0P0 153 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 ANKRD36BQ8N2N9 1353 aa9.31□□□□□ -0.92
CCL1-201ENST00000225842 GHRHP01286 108 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 LBX1P52954 281 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
CCL1-201ENST00000225842 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 CCDC155Q8N6L0 562 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 CELF2-AS1Q8N7Q2 184 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 GATAD2BQ8WXI9 593 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
CCL1-201ENST00000225842 FERD3LQ96RJ6 166 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 ST7Q9NRC1 585 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 WNK3Q9BYP7 1800 aa9.3□□□□□ -0.92
CCL1-201ENST00000225842 VEGFAP15692 232 aaPredicted RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 EIF2AK2P19525 551 aaKnown RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 FGFR3P22607 806 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 KANK3Q6NY19 840 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 ZNF837Q96EG3 531 aaPredicted RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 CRBNQ96SW2 442 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 LRRC3Q9BY71 257 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 UBE2OQ9C0C9 1292 aaKnown RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 CLEC4MQ9H2X3 399 aaPredicted RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 DNAJB12Q9NXW2 375 aaKnown RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 ATXN7L1Q9ULK2 861 aaPredicted RBP9.29□□□□□ -0.92
CCL1-201ENST00000225842 SAMM50Q9Y512 469 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 COL18A1P39060 1754 aa9.29□□□□□ -0.92
CCL1-201ENST00000225842 PXDNLA1KZ92 1463 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 NSD2O96028 1365 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 FAM221AA4D161 298 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 BMP6P22004 513 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 PCDH1Q08174 1060 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 CWF19L2Q2TBE0 894 aaKnown RBP9.28□□□□□ -0.92
CCL1-201ENST00000225842 GK5Q6ZS86 529 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 STK35Q8TDR2 534 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 BSNDQ8WZ55 320 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 CBX8Q9HC52 389 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
CCL1-201ENST00000225842 TUBGCP6Q96RT7 1819 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 ENPP3O14638 875 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 SMNDC1O75940 238 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCL1-201ENST00000225842 MMP10P09238 476 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 DPEP1P16444 411 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 NME2P22392 152 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 GIPRP48546 466 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 CHMP4BP1P59074 171 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 MPP2Q14168 576 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 PTPROQ16827 1216 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 ADAMTSL4Q6UY14 1074 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 CCDC84Q86UT8 332 aaPredicted RBP9.27□□□□□ -0.93
CCL1-201ENST00000225842 AMIGO3Q86WK7 504 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 SULF2Q8IWU5 870 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 GRIN3AQ8TCU5 1115 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 SIN3AQ96ST3 1273 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 RBSNQ9H1K0 784 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 ATP13A2Q9NQ11 1180 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
CCL1-201ENST00000225842 ZNF165P49910 485 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 CTBSQ01459 385 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 ZNF423Q2M1K9 1284 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 DNAJC7Q99615 494 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 ACTR10Q9NZ32 417 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
CCL1-201ENST00000225842 ST8SIA5O15466 376 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 CILPO75339 1184 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 DGAT1O75907 488 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 BPNT1O95861 308 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 CPB1P15086 417 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 CLCQ05315 142 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 LLGL2Q6P1M3 1020 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 REC114Q7Z4M0 266 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 SYT9Q86SS6 491 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 MICALL1Q8N3F8 863 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 SH3TC2Q8TF17 1288 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 CYP8B1Q9UNU6 501 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 PHF24Q9UPV7 400 aa9.25□□□□□ -0.93
CCL1-201ENST00000225842 NSD3Q9BZ95 1437 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 hCG_2014768A0A024R1R8 64 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 GLTPD2A6NH11 291 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 GPR25O00155 361 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 B3GALT4O96024 378 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 ITGA6P23229 1130 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms