RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 FOXP1Q9H334 677 aaPredicted RBP18.08■□□□□ 0.49
SF3A2-201ENST00000221494 TTF2Q9UNY4 1162 aaKnown RBP18.08■□□□□ 0.49
SF3A2-201ENST00000221494 PNPLA7Q6ZV29 1317 aa18.08■□□□□ 0.48
SF3A2-201ENST00000221494 MCAMP43121 646 aa18.08■□□□□ 0.48
SF3A2-201ENST00000221494 WHAMMP3Q1A5X7 153 aa18.08■□□□□ 0.48
SF3A2-201ENST00000221494 NOSTRINQ8IVI9 506 aa18.08■□□□□ 0.48
SF3A2-201ENST00000221494 ADGRG1Q9Y653 693 aa18.08■□□□□ 0.48
SF3A2-201ENST00000221494 FMNL1O95466 1100 aaPredicted RBP18.07■□□□□ 0.48
SF3A2-201ENST00000221494 ARID4AP29374 1257 aaPredicted RBP18.07■□□□□ 0.48
SF3A2-201ENST00000221494 ZAP70P43403 619 aa18.07■□□□□ 0.48
SF3A2-201ENST00000221494 BEND6Q5SZJ8 279 aaPredicted RBP18.07■□□□□ 0.48
SF3A2-201ENST00000221494 PI16Q6UXB8 463 aa18.07■□□□□ 0.48
SF3A2-201ENST00000221494 LEKR1Q6ZMV7 388 aa18.07■□□□□ 0.48
SF3A2-201ENST00000221494 RASGRP2Q7LDG7 609 aa18.07■□□□□ 0.48
SF3A2-201ENST00000221494 GJB4Q9NTQ9 266 aa18.07■□□□□ 0.48
SF3A2-201ENST00000221494 FBXO2Q9UK22 296 aaPredicted RBP18.07■□□□□ 0.48
SF3A2-201ENST00000221494 ZBTB22O15209 634 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 UBE3CQ15386 1083 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 PPFIBP1Q86W92 1011 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 IQSEC3Q9UPP2 1182 aaPredicted RBP18.06■□□□□ 0.48
SF3A2-201ENST00000221494 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.06■□□□□ 0.48
SF3A2-201ENST00000221494 IFNAR1P17181 557 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 CDC27P30260 824 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 PBX1P40424 430 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 SSRP1Q08945 709 aaKnown RBP18.06■□□□□ 0.48
SF3A2-201ENST00000221494 SPATA1Q5VX52 437 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 CNGA4Q8IV77 575 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 CLIC6Q96NY7 704 aa18.06■□□□□ 0.48
SF3A2-201ENST00000221494 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
SF3A2-201ENST00000221494 WTIPA6NIX2 430 aaPredicted RBP18.05■□□□□ 0.48
SF3A2-201ENST00000221494 UQCRFS1P1P0C7P4 283 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 ADD2P35612 726 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 UBE4AQ14139 1066 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 FAM177A1Q8N128 213 aaPredicted RBP18.05■□□□□ 0.48
SF3A2-201ENST00000221494 STK11IPQ8N1F8 1099 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 NBPF3Q9H094 633 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 PUS7LQ9H0K6 701 aaKnown RBP18.05■□□□□ 0.48
SF3A2-201ENST00000221494 MED4Q9NPJ6 270 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 L1RE1Q9UN81 338 aa18.05■□□□□ 0.48
SF3A2-201ENST00000221494 SRPRBQ9Y5M8 271 aaKnown RBP18.05■□□□□ 0.48
SF3A2-201ENST00000221494 CTAGE9A4FU28 777 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 GOLGA8AA7E2F4 631 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 MMP1P03956 469 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 ADKP55263 362 aaKnown RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 TRIM14Q14142 442 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 FILIP1LQ4L180 1135 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 NOM1Q5C9Z4 860 aaKnown RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 FAM71BQ8TC56 605 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 ANKZF1Q9H8Y5 726 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 MRPL44Q9H9J2 332 aaKnown RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 RGPD3A6NKT7 1758 aaPredicted RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 RGPD4Q7Z3J3 1758 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 ARAP2Q8WZ64 1704 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 KLRG2A4D1S0 409 aaPredicted RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 MCM3P25205 808 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 GOLGA8FQ08AF8 430 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 GOLGA8DPQ0D2H9 430 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 GRAPQ13588 217 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 SRLQ86TD4 932 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 GRAPLQ8TC17 118 aaPredicted RBP18.04■□□□□ 0.48
SF3A2-201ENST00000221494 CNNM2Q9H8M5 875 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 VIPAS39Q9H9C1 493 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 KCNG1Q9UIX4 513 aa18.04■□□□□ 0.48
SF3A2-201ENST00000221494 DOCK2Q92608 1830 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 H3BQF6 201 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 ACTN4O43707 911 aaKnown RBP18.03■□□□□ 0.48
SF3A2-201ENST00000221494 BCAMP50895 628 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 CYB5R4Q7L1T6 521 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 APTXQ7Z2E3 356 aaKnown RBP18.03■□□□□ 0.48
SF3A2-201ENST00000221494 TMTC1Q8IUR5 882 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 AIFM3Q96NN9 605 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 LY9Q9HBG7 655 aa18.03■□□□□ 0.48
SF3A2-201ENST00000221494 ZCCHC17Q9NP64 241 aaKnown RBP18.03■□□□□ 0.48
SF3A2-201ENST00000221494 MYO1CO00159 1063 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 RANBP6O60518 1105 aaKnown RBP18.02■□□□□ 0.48
SF3A2-201ENST00000221494 MFAP3LO75121 409 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 BMP15O95972 392 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 LMAN1P49257 510 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 CDKAL1Q5VV42 579 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 WDR93Q6P2C0 686 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 TBC1D10CQ8IV04 446 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 TRIM22Q8IYM9 498 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 GOLGA6L1Q8N7Z2 621 aa18.02■□□□□ 0.48
SF3A2-201ENST00000221494 FAM217BQ9NTX9 383 aaPredicted RBP18.02■□□□□ 0.48
SF3A2-201ENST00000221494 RASGRF1Q13972 1273 aa18.02■□□□□ 0.47
SF3A2-201ENST00000221494 ANKRD2Q9GZV1 360 aa18.02■□□□□ 0.47
SF3A2-201ENST00000221494 ADD3Q9UEY8 706 aaKnown RBP18.02■□□□□ 0.47
SF3A2-201ENST00000221494 SERTAD1Q9UHV2 236 aa18.02■□□□□ 0.47
SF3A2-201ENST00000221494 MYH6P13533 1939 aa18.01■□□□□ 0.47
SF3A2-201ENST00000221494 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
SF3A2-201ENST00000221494 POLR2DO15514 142 aaKnown RBP18.01■□□□□ 0.47
SF3A2-201ENST00000221494 KARSQ15046 597 aaKnown RBP18.01■□□□□ 0.47
SF3A2-201ENST00000221494 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
SF3A2-201ENST00000221494 IGSF22Q8N9C0 903 aa18.01■□□□□ 0.47
SF3A2-201ENST00000221494 SPATA5Q8NB90 893 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms