RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
CSNK2A1-201ENST00000217244 CACNA2D4Q7Z3S7 1137 aa9.73□□□□□ -0.85
CSNK2A1-201ENST00000217244 DDX39AO00148 427 aaKnown RBP9.73□□□□□ -0.85
CSNK2A1-201ENST00000217244 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
CSNK2A1-201ENST00000217244 CACNB1Q02641 598 aaPredicted RBP9.73□□□□□ -0.85
CSNK2A1-201ENST00000217244 TEKT1Q969V4 418 aa9.73□□□□□ -0.85
CSNK2A1-201ENST00000217244 MYO1BO43795 1136 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 MATR3P43243 847 aaKnown RBP eCLIP9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 PDE4DQ08499 809 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 CCDC144BQ3MJ40 725 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 STAG1Q8WVM7 1258 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■■■■■ 32.6
CSNK2A1-201ENST00000217244 SAMSN1Q9NSI8 373 aaKnown RBP9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 ABCC12Q96J65 1359 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 NWD1Q149M9 1564 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 C21orf2O43822 256 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 SORBS3O60504 671 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 IBSPP21815 317 aaPredicted RBP9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 GNA11P29992 359 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 FAM193AP78312 1265 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 UBE2SQ16763 222 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 HS1BP3Q53T59 392 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 MIGA2Q7L4E1 593 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 NELFCDQ8IXH7 590 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 RAB34Q9BZG1 259 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 CFBP00751 764 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 CDK8P49336 464 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 VPS72Q15906 364 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 TBC1D10BQ4KMP7 808 aaPredicted RBP9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 SHC4Q6S5L8 630 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 REXO1Q8N1G1 1221 aaKnown RBP9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 LEMD3Q9Y2U8 911 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 ADAMTSL3P82987 1691 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 IGSF22Q8N9C0 903 aa9.72□□□□□ -0.85
CSNK2A1-201ENST00000217244 PSMA7O14818 248 aa9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 GRIK5Q16478 980 aa9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 KRT79Q5XKE5 535 aa9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 FMR1NBQ8N0W7 255 aaPredicted RBP9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 STK32BQ9NY57 414 aa9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 RGPD2P0DJD1 1756 aa9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
CSNK2A1-201ENST00000217244 AP5Z1O43299 807 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 CASQ1P31415 396 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 SRBD1Q8N5C6 995 aaKnown RBP9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 CCDC150Q8NCX0 1101 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 CUL5Q93034 780 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 RNF26Q9BY78 433 aaPredicted RBP9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 PUF60Q9UHX1 559 aaKnown RBP9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 SYNRGQ9UMZ2 1314 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 DCCP43146 1447 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 SPDYE3A6NKU9 549 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 TMEM47Q9BQJ4 181 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 LRWD1Q9UFC0 647 aa9.71□□□□□ -0.86
CSNK2A1-201ENST00000217244 USP17L5A8MUK1 530 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TMEM232C9JQI7 657 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 BMP15O95972 392 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 FGFR2P21802 821 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 CYP4A11Q02928 519 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 FKBP15Q5T1M5 1219 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 NLGN1Q8N2Q7 840 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 KIFC2Q96AC6 838 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 CEP95Q96GE4 821 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 GUCA1BQ9UMX6 200 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 ZSCAN12O43309 604 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TNNT3P45378 269 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 GJA10Q969M2 543 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TDRD3Q9H7E2 651 aaKnown RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 A0A1W2PQ27 194 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 A0A1W2PQ64 194 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 A0A1W2PQD8 194 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 KIF5CO60282 957 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 ZFYVE27Q5T4F4 411 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TDRD7Q8NHU6 1098 aaKnown RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 KCNB2Q92953 911 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 BAG1Q99933 345 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TNS2Q63HR2 1409 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 MROH7-TTC4A0A0A0MT08 1334 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 NEMFO60524 1076 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 USP8P40818 1118 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TMTC3Q6ZXV5 915 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 CABP7Q86V35 215 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 LRRC8AQ8IWT6 810 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 TBC1D22AQ8WUA7 517 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 PSMB7Q99436 277 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 SLC39A2Q9NP94 309 aa9.7□□□□□ -0.86
CSNK2A1-201ENST00000217244 ARGLU1Q9NWB6 273 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms