RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 PAPPA2Q9BXP8 1791 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 GDF11O95390 407 aa18.29■□□□□ 0.52
TMED1-201ENST00000214869 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
TMED1-201ENST00000214869 PKP1Q13835 747 aa18.29■□□□□ 0.52
TMED1-201ENST00000214869 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
TMED1-201ENST00000214869 MIGA2Q7L4E1 593 aa18.29■□□□□ 0.52
TMED1-201ENST00000214869 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
TMED1-201ENST00000214869 ZNF341Q9BYN7 854 aa18.29■□□□□ 0.52
TMED1-201ENST00000214869 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
TMED1-201ENST00000214869 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
TMED1-201ENST00000214869 BAZ2BQ9UIF8 2168 aaKnown RBP18.29■□□□□ 0.52
TMED1-201ENST00000214869 CTNND1O60716 968 aaKnown RBP18.28■□□□□ 0.52
TMED1-201ENST00000214869 ASNSP08243 561 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
TMED1-201ENST00000214869 ICA1Q05084 483 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 SSRP1Q08945 709 aaKnown RBP18.28■□□□□ 0.52
TMED1-201ENST00000214869 CLEC17AQ6ZS10 378 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 RNF26Q9BY78 433 aaPredicted RBP18.28■□□□□ 0.52
TMED1-201ENST00000214869 MAD2L2Q9UI95 211 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
TMED1-201ENST00000214869 PRPF3O43395 683 aaKnown RBP18.27■□□□□ 0.52
TMED1-201ENST00000214869 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
TMED1-201ENST00000214869 SULF1Q8IWU6 871 aa18.27■□□□□ 0.52
TMED1-201ENST00000214869 TRIM22Q8IYM9 498 aa18.27■□□□□ 0.52
TMED1-201ENST00000214869 GMCL1P1Q8NEA9 526 aa18.27■□□□□ 0.52
TMED1-201ENST00000214869 DTNBO60941 627 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 PLEKHA8P1O95397 391 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 PARP1P09874 1014 aaKnown RBP18.26■□□□□ 0.51
TMED1-201ENST00000214869 ZSCAN22P10073 491 aaPredicted RBP18.26■□□□□ 0.51
TMED1-201ENST00000214869 PDHBP11177 359 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 LRRC47Q8N1G4 583 aaKnown RBP18.26■□□□□ 0.51
TMED1-201ENST00000214869 SRBD1Q8N5C6 995 aaKnown RBP18.26■□□□□ 0.51
TMED1-201ENST00000214869 WASF1Q92558 559 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 PHKBQ93100 1093 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
TMED1-201ENST00000214869 CNTNAP5Q8WYK1 1306 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 PHIPQ8WWQ0 1821 aa18.26■□□□□ 0.51
TMED1-201ENST00000214869 DEXIO95424 95 aa18.25■□□□□ 0.51
TMED1-201ENST00000214869 DCAF4Q8WV16 495 aa18.25■□□□□ 0.51
TMED1-201ENST00000214869 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
TMED1-201ENST00000214869 SPZ1Q9BXG8 430 aa18.25■□□□□ 0.51
TMED1-201ENST00000214869 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
TMED1-201ENST00000214869 ARHGEF10LQ9HCE6 1279 aa18.25■□□□□ 0.51
TMED1-201ENST00000214869 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
TMED1-201ENST00000214869 USP17L5A8MUK1 530 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 ZNF543Q08ER8 600 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 GPATCH4Q5T3I0 446 aaKnown RBP18.24■□□□□ 0.51
TMED1-201ENST00000214869 KRT26Q7Z3Y9 468 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 STAG2Q8N3U4 1231 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 FBXO18Q8NFZ0 1043 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 GMCL1Q96IK5 515 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 MYH15Q9Y2K3 1946 aa18.24■□□□□ 0.51
TMED1-201ENST00000214869 KLRF2D3W0D1 207 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
TMED1-201ENST00000214869 NOL9Q5SY16 702 aaKnown RBP18.23■□□□□ 0.51
TMED1-201ENST00000214869 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 USP48Q86UV5 1035 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 KLRG1Q96E93 195 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 ALG1Q9BT22 464 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 SH2D4AQ9H788 454 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 TCHHQ07283 1943 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 OTOFQ9HC10 1997 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 A0A1W2PRG0 241 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 F13A1P00488 732 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 ATP2B2Q01814 1243 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 PKN1Q16512 942 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 SLC35G1Q2M3R5 365 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 PRAMEF18Q5VWM3 479 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 FAM177A1Q8N128 213 aaPredicted RBP18.23■□□□□ 0.51
TMED1-201ENST00000214869 CMTR1Q8N1G2 835 aaKnown RBP18.23■□□□□ 0.51
TMED1-201ENST00000214869 C8orf76Q96K31 380 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
TMED1-201ENST00000214869 VPS37CA5D8V6 355 aaPredicted RBP18.22■□□□□ 0.51
TMED1-201ENST00000214869 F5H6K3 240 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 H3BQV1 296 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 USP2O75604 605 aaPredicted RBP18.22■□□□□ 0.51
TMED1-201ENST00000214869 INPP5BP32019 993 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 AKAP17AQ02040 695 aaKnown RBP18.22■□□□□ 0.51
TMED1-201ENST00000214869 KLRC3Q07444 240 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 CDC37L1Q7L3B6 337 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 WDR18Q9BV38 432 aa18.22■□□□□ 0.51
TMED1-201ENST00000214869 V9GY48 417 aaPredicted RBP18.22■□□□□ 0.51
TMED1-201ENST00000214869 CYTH3O43739 400 aa18.21■□□□□ 0.51
TMED1-201ENST00000214869 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
TMED1-201ENST00000214869 NDUFB10O96000 172 aa18.21■□□□□ 0.51
TMED1-201ENST00000214869 PFKFB3Q16875 520 aaPredicted RBP18.21■□□□□ 0.51
TMED1-201ENST00000214869 RASGRP2Q7LDG7 609 aa18.21■□□□□ 0.51
TMED1-201ENST00000214869 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
TMED1-201ENST00000214869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.21■□□□□ 0.511e-8■■□□□ 14.1
TMED1-201ENST00000214869 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
TMED1-201ENST00000214869 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms