RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 NPM3O75607 178 aaKnown RBP21.41■■□□□ 1.02
CTSA-201ENST00000191018 TYRO3Q06418 890 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 EHD4Q9H223 541 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 A0A1B0GVL5 298 aa21.4■■□□□ 1.02
CTSA-201ENST00000191018 KINO60870 393 aaKnown RBP21.4■■□□□ 1.02
CTSA-201ENST00000191018 TOP1P11387 765 aaKnown RBP21.4■■□□□ 1.02
CTSA-201ENST00000191018 MARCKSP29966 332 aaPredicted RBP21.4■■□□□ 1.02
CTSA-201ENST00000191018 NDUFA8P51970 172 aa21.4■■□□□ 1.02
CTSA-201ENST00000191018 SLC35G1Q2M3R5 365 aa21.4■■□□□ 1.02
CTSA-201ENST00000191018 TNFRSF25Q93038 417 aa21.4■■□□□ 1.02
CTSA-201ENST00000191018 MRVI1Q9Y6F6 885 aa21.4■■□□□ 1.02
CTSA-201ENST00000191018 LZTS2Q9BRK4 669 aa21.39■■□□□ 1.02
CTSA-201ENST00000191018 COL4A5P29400 1685 aa21.39■■□□□ 1.01
CTSA-201ENST00000191018 CYTH3O43739 400 aa21.39■■□□□ 1.01
CTSA-201ENST00000191018 HLA-DOAP06340 250 aa21.39■■□□□ 1.01
CTSA-201ENST00000191018 SHMT1P34896 483 aa21.39■■□□□ 1.01
CTSA-201ENST00000191018 MTMR4Q9NYA4 1195 aa21.39■■□□□ 1.01
CTSA-201ENST00000191018 MORC2Q9Y6X9 1032 aaPredicted RBP21.39■■□□□ 1.01
CTSA-201ENST00000191018 FAM237AA0A1B0GTK4 181 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 AKR1B1P15121 316 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 VEGFAP15692 232 aaPredicted RBP21.38■■□□□ 1.01
CTSA-201ENST00000191018 ZFPM1Q8IX07 1006 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 DHX36Q9H2U1 1008 aaKnown RBP21.38■■□□□ 1.01
CTSA-201ENST00000191018 BRMS1Q9HCU9 246 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 CABP5Q9NP86 173 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 SH3GLB2Q9NR46 395 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 FAM198AQ9UFP1 575 aa21.38■■□□□ 1.01
CTSA-201ENST00000191018 BRCA1P38398 1863 aaKnown RBP21.38■■□□□ 1.01
CTSA-201ENST00000191018 CUTAO60888 179 aa21.37■■□□□ 1.01
CTSA-201ENST00000191018 VPS33BQ9H267 617 aa21.37■■□□□ 1.01
CTSA-201ENST00000191018 HPSEQ9Y251 543 aa21.37■■□□□ 1.01
CTSA-201ENST00000191018 PCDHB6Q9Y5E3 794 aa21.37■■□□□ 1.01
CTSA-201ENST00000191018 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.011e-13■■■□□ 18.6
CTSA-201ENST00000191018 EARS2Q5JPH6 523 aaKnown RBP21.37■■□□□ 1.01
CTSA-201ENST00000191018 SHC4Q6S5L8 630 aa21.37■■□□□ 1.01
CTSA-201ENST00000191018 SPZ1Q9BXG8 430 aa21.37■■□□□ 1.01
CTSA-201ENST00000191018 PFKFB1P16118 471 aa21.36■■□□□ 1.01
CTSA-201ENST00000191018 SMARCA1P28370 1054 aa21.36■■□□□ 1.01
CTSA-201ENST00000191018 SASS6Q6UVJ0 657 aa21.36■■□□□ 1.01
CTSA-201ENST00000191018 FAM205CA6NFA0 338 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 KLRF2D3W0D1 207 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 PARP1P09874 1014 aaKnown RBP21.35■■□□□ 1.01
CTSA-201ENST00000191018 CACNB3P54284 484 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 TGFB2P61812 414 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 RESP18Q5W5W9 173 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 RASGRP2Q7LDG7 609 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 DNAJC18Q9H819 358 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 MYH4Q9Y623 1939 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 ZNF202O95125 648 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 PTPREP23469 700 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 NLRP5P59047 1200 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 SH3BP5LQ7L8J4 393 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 FAM177A1Q8N128 213 aaPredicted RBP21.35■■□□□ 1.01
CTSA-201ENST00000191018 KRI1Q8N9T8 703 aaKnown RBP21.35■■□□□ 1.01
CTSA-201ENST00000191018 FAM200AQ8TCP9 573 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 CEP131Q9UPN4 1083 aa21.35■■□□□ 1.01
CTSA-201ENST00000191018 DDTLA6NHG4 134 aaPredicted RBP21.34■■□□□ 1.01
CTSA-201ENST00000191018 VIL1P09327 827 aaKnown RBP21.34■■□□□ 1.01
CTSA-201ENST00000191018 CALML3P27482 149 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 CFAP100Q494V2 611 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 SOGA3Q5TF21 947 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 RSBN1LQ6PCB5 846 aaPredicted RBP21.34■■□□□ 1.01
CTSA-201ENST00000191018 TIGD1Q96MW7 591 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 CLIC6Q96NY7 704 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 GMLQ99445 158 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 FBXO2Q9UK22 296 aaPredicted RBP21.34■■□□□ 1.01
CTSA-201ENST00000191018 MTMR7Q9Y216 660 aa21.34■■□□□ 1.01
CTSA-201ENST00000191018 COL2A1P02458 1487 aaPredicted RBP21.34■■□□□ 1.01
CTSA-201ENST00000191018 ZBTB7AO95365 584 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 GOLGA8HP0CJ92 632 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 SNHG28P0DPA3 235 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 TCP10Q12799 353 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 ANO6Q4KMQ2 910 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 USP17L2Q6R6M4 530 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 LARGE2Q8N3Y3 721 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 CCDC17Q96LX7 622 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 ZNF277Q9NRM2 450 aaPredicted RBP21.33■■□□□ 1.01
CTSA-201ENST00000191018 PI4KBQ9UBF8 816 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 ATRNL1Q5VV63 1379 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 FER1L6Q2WGJ9 1857 aa21.33■■□□□ 1.01
CTSA-201ENST00000191018 TRIM75PA6NK02 468 aa21.32■■□□□ 1
CTSA-201ENST00000191018 TTLL1O95922 423 aa21.32■■□□□ 1
CTSA-201ENST00000191018 PDHBP11177 359 aa21.32■■□□□ 1
CTSA-201ENST00000191018 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
CTSA-201ENST00000191018 GPKOWQ92917 476 aaPredicted RBP eCLIP21.32■■□□□ 1
CTSA-201ENST00000191018 PRMT6Q96LA8 375 aaPredicted RBP21.32■■□□□ 1
CTSA-201ENST00000191018 TDRD3Q9H7E2 651 aaKnown RBP21.32■■□□□ 1
CTSA-201ENST00000191018 PIM2Q9P1W9 311 aa21.32■■□□□ 1
CTSA-201ENST00000191018 CAVIN2O95810 425 aa21.32■■□□□ 1
CTSA-201ENST00000191018 NOM1Q5C9Z4 860 aaKnown RBP21.32■■□□□ 1
CTSA-201ENST00000191018 WWC2Q6AWC2 1192 aa21.32■■□□□ 1
CTSA-201ENST00000191018 METTL16Q86W50 562 aaKnown RBP21.32■■□□□ 1
CTSA-201ENST00000191018 ZNF579Q8NAF0 562 aaKnown RBP21.32■■□□□ 1
CTSA-201ENST00000191018 SDF4Q9BRK5 362 aa21.32■■□□□ 1
CTSA-201ENST00000191018 MTFR1LQ9H019 292 aa21.32■■□□□ 1
CTSA-201ENST00000191018 BARHL2Q9NY43 387 aa21.32■■□□□ 1
CTSA-201ENST00000191018 NOL7Q9UMY1 257 aaKnown RBP21.32■■□□□ 1
CTSA-201ENST00000191018 SRPRBQ9Y5M8 271 aaKnown RBP21.32■■□□□ 1
CTSA-201ENST00000191018 USP17L5A8MUK1 530 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms