RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PCDHA1Q9Y5I3 950 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 MED14O60244 1454 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 ABCA6Q8N139 1617 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 STX10O60499 249 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 PFKFB2O60825 505 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 NT5C2P49902 561 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 LUC7L2Q9Y383 392 aaKnown RBP11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 ADCY9O60503 1353 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 ZNF521Q96K83 1311 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 LPXNO60711 386 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 RAPGEF1Q13905 1077 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 PRR16Q569H4 304 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 CCDC113Q9H0I3 377 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 CTNND2Q9UQB3 1225 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 ZC3H13Q5T200 1668 aaKnown RBP11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 UQCRHLA0A096LP55 91 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 JAK2O60674 1132 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 UQCRHP07919 91 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 KIF5AQ12840 1032 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 C16orf45Q96MC5 204 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 PALD1Q9ULE6 856 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 QRICH2Q9H0J4 1663 aa11.58□□□□□ -0.56
NIPAL3-201ENST00000003912 PTGS1P23219 599 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 SNX16P57768 344 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 CKAP4Q07065 602 aaKnown RBP11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 VWA3BQ502W6 1294 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 NEK8Q86SG6 692 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 KRT5P13647 590 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 RC3H1Q5TC82 1133 aaKnown RBP11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 DEPTORQ8TB45 409 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 SLC10A4Q96EP9 437 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 KRT86O43790 486 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 MECOMQ03112 1051 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 GDF11O95390 407 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 RASGRF1Q13972 1273 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 ME3Q16798 604 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 MAP4K1Q92918 833 aa11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 MRPL44Q9H9J2 332 aaKnown RBP11.57□□□□□ -0.56
NIPAL3-201ENST00000003912 NOSTRINQ8IVI9 506 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 CCDC175P0C221 793 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 SMC1AQ14683 1233 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 FAM160B1Q5W0V3 765 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 ZBTB8OSQ8IWT0 167 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 SPICE1Q8N0Z3 855 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 CSGALNACT2Q8N6G5 542 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 PCDHA12Q9UN75 941 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 MINPP1Q9UNW1 487 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 RPAP1Q9BWH6 1393 aaPredicted RBP11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 GOLGA6L7A0A1B0GV03 622 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 H0YCG3 227 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 M0R2C6 588 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 GCNT3O95395 438 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 BMP3P12645 472 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 SKILP12757 684 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 POLA2Q14181 598 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 DYMQ7RTS9 669 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 SYNE4Q8N205 404 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 LCORLQ8N3X6 602 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 C2orf69Q8N8R5 385 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 MLKLQ8NB16 471 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 ANTXR1Q9H6X2 564 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 DIP2BQ9P265 1576 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 EXOC3O60645 756 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 PAK1Q13153 545 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 CNGA4Q8IV77 575 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 CMTR1Q8N1G2 835 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 METTL13Q8N6R0 699 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 LEO1Q8WVC0 666 aaPredicted RBP11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 GOLGA1Q92805 767 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 NOX5Q96PH1 765 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 ECE2O60344 883 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 KIAA0754O94854 1291 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 ADD1P35611 737 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 TBC1D8BQ0IIM8 1120 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 TICAM2Q86XR7 235 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 NRBP2Q9NSY0 501 aa11.56□□□□□ -0.56
NIPAL3-201ENST00000003912 hCG_1984214I3L0E3 225 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 GJC1P36383 396 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 PDCL2Q8N4E4 241 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 ZNF713Q8N859 430 aaPredicted RBP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 TSNARE1Q96NA8 513 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 DDX25Q9UHL0 483 aaKnown RBP11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 RASAL2Q9UJF2 1139 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 IGKV5-2P06315 115 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 MYSM1Q5VVJ2 828 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 NBPF3Q9H094 633 aa11.55□□□□□ -0.56
NIPAL3-201ENST00000003912 RNF181Q9P0P0 153 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms