RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Epb41l3Q9WV92 929 aa11.91□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Ppp2r3dQ9Z176 491 aa11.91□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Ltn1Q6A009 1767 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Cyp3a25O09158 503 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Traf3ip1Q149C2 625 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Ppp2r5bQ6PD28 497 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Ube2oQ6ZPJ3 1288 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Dusp9Q7TNL7 452 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Arid5bQ8BM75 1188 aaKnown RBP11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Triml1Q8BVP1 470 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Myl6bQ8CI43 207 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Q8K2W9 541 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Lonrf3Q9D4H7 753 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Hic2Q9JLZ6 619 aaKnown RBP11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Tob2Q9JM55 345 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Mkrn1Q9QXP6 481 aa11.9□□□□□ -0.5
Ptpre-208ENSMUST00000211788 Sycp2lA0A0M3U1B0 842 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Gm3893E9Q1I1 302 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Gm10134F6ZQC6 126 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Usp53P15975 1069 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Nbr1P97432 988 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Esyt2Q3TZZ7 845 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Gucy2cQ3UWA6 1072 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 MycbpapQ5SUV2 932 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ift122Q6NWV3 1182 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tmem179Q8BHH9 233 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Strip1Q8C079 837 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 MbipQ99LQ1 341 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Dynll2Q9D0M5 89 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Vnn1Q9Z0K8 512 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Igsf9bE9PZ19 1328 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Calm1P0DP26 149 aaKnown RBP11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Calm2P0DP27 149 aaKnown RBP11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Calm3P0DP28 149 aaKnown RBP11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Aak1Q3UHJ0 959 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Cep131Q62036 1060 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ccp110Q7TSH4 1004 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ctdspl2Q8BG15 465 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ccdc186Q8C9S4 917 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Sugp2Q8CH09 1067 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Stn1Q8K2X3 378 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Kri1Q8VDQ9 704 aaKnown RBP11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Vps16Q920Q4 839 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Prpf3Q922U1 683 aaKnown RBP11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ndufb9Q9CQJ8 179 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Eif4enif1Q9EST3 983 aaKnown RBP11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 ChmQ9QXG2 665 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 GdaQ9R111 454 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Col20a1Q923P0 1320 aa11.89□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Phldb3E9QAF4 648 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 RargP18911 458 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ftl1P29391 183 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tubb4bP68372 445 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tmed8Q3UHI4 326 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Kif22Q3V300 660 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Znf532Q6NXK2 1036 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tekt3Q6X6Z7 490 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tmco3Q8BH01 678 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tmem87aQ8BXN9 555 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Sumf1Q8R0F3 372 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Eif3cQ8R1B4 911 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 CpzQ8R4V4 654 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Krt23Q99PS0 422 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Xpo4Q9ESJ0 1151 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Grin2dQ03391 1323 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Atp8b5A3FIN4 1183 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Nrg3O35181 713 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Zmym1Q3TJB1 983 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ddx42Q810A7 929 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Eif2b5Q8CHW4 717 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Rbm19Q8R3C6 952 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Slc44a4Q91VA1 707 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 St5Q924W7 1134 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Polr2dQ9D7M8 142 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ipo7Q9EPL8 1038 aaKnown RBP11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Elf2Q9JHC9 593 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Atp12aQ9Z1W8 1035 aa11.88□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Znf609Q8BZ47 1413 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Epb41l2O70318 988 aaKnown RBP11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Psd3Q2PFD7 1037 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ccdc102aQ3TMW1 549 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Usp49Q6P9L4 685 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Pramel6Q810Y9 485 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Frmd3Q8BHD4 595 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 DlatQ8BMF4 642 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Gimap7Q8R379 293 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ndufv1Q91YT0 464 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ankrd1Q9CR42 319 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Col11a2Q64739 1736 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 PparaP23204 468 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Wnt7aP24383 349 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ptpn12P35831 775 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 C87499Q3UX49 493 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Tmtc2Q56A06 836 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Pex1Q5BL07 1284 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Ctnna3Q65CL1 895 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Csrnp2Q8BGQ2 534 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Kiaa1524Q8BWY9 907 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Fam76aQ922G2 307 aa11.87□□□□□ -0.51
Ptpre-208ENSMUST00000211788 Wdr64Q9D565 1086 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms