RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Cnga2Q62398 664 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Znf771Q8BJ90 317 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Prpf3Q922U1 683 aaKnown RBP12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Mroh6V9GX81 722 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Dennd3A2RT67 1274 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Trim34bJ3QNR8 485 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Folh1O35409 752 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Api5O35841 504 aaKnown RBP12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Chp1P61022 195 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Cct5P80316 541 aaKnown RBP12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Ppp1r7Q3UM45 361 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Txndc5Q91W90 417 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Angptl3Q9R182 455 aa12.15□□□□□ -0.46
Rnf40-206ENSMUST00000206914 Foxn2E9Q7L6 429 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Slc4a4O88343 1079 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Cops6O88545 324 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Adam6bQ6IMH7 756 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Cdhr2E9Q7P9 1308 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Gm4340L7N2C4 268 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Q3TYL0 343 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ppp1r1bQ60829 194 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Irak1Q62406 710 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Maip1Q8BHE8 291 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Osbpl1aQ91XL9 950 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Apopt1Q9CQW7 192 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Dbndd2Q9CRD4 158 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Dnajc7Q9QYI3 494 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Gm10378F6XQQ1 160 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Speer4dL7N216 212 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Cfap69Q8BH53 942 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 E2f4Q8R0K9 410 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 MycbpQ9EQS3 103 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 IcoslgQ9JHJ8 322 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Plekho1Q9JIY0 408 aa12.14□□□□□ -0.47
Rnf40-206ENSMUST00000206914 A0A0U1RNP2 1173 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Pafah1b1P63005 410 aaKnown RBP12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ddx3yQ62095 658 aaKnown RBP12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Fam170aQ66LM6 333 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 BcrQ6PAJ1 1270 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Kif2bQ8C0N1 668 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Phc3Q8CHP6 981 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 FliiQ9JJ28 1271 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Scgb2b11A0A087WR49 112 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Bin2D3Z6Q9 489 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Trappc10Q3TLI0 1259 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Sema4bQ62179 823 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Zc3h6Q8BYK8 1177 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Tldc1Q8K0P3 455 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ccdc14Q8K2J4 934 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Sipa1l3G3X9J0 1776 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Gm43738A0A0G2JEA5 862 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Pth1rP41593 591 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Tmem232Q5K6N0 675 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Smg7Q5RJH6 1138 aaKnown RBP12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Olfm5Q8BU90 496 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 MtrrQ8C1A3 696 aa12.13□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Myh13B1AR69 1938 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 IkbkbO88351 757 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Calm1P0DP26 149 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Calm2P0DP27 149 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Calm3P0DP28 149 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Sec23aQ01405 765 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Kdm7aQ3UWM4 940 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 WhrnQ80VW5 918 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 LgsnQ8CIX8 563 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Trap1Q9CQN1 706 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Znf638Q61464 1960 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Serpina16D3Z660 418 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Speer4aF8VPX6 267 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 MyclP10166 368 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 MarcksP26645 309 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Surf6P70279 355 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Zmym1Q3TJB1 983 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Slc38a10Q5I012 1090 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Bpifb6Q8BU51 449 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ttc12Q8BW49 704 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Leng8Q8CBY3 785 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Nod2Q8K3Z0 1020 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Cgref1Q8R1U2 281 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 AfdnQ9QZQ1 1820 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Akap2O54931 893 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Aggf1Q7TN31 711 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 LpxnQ99N69 386 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 CutaQ9CQ89 177 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 RpainQ9CWY9 219 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Klhl10Q9D5V2 608 aa12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 SetQ9EQU5 289 aaKnown RBP12.12□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Bbof1Q3V079 533 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ccdc157Q5SPX1 718 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ttc26Q8BS45 554 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Morc2bQ8C5W4 1022 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Ccdc38Q8CDN8 563 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Six6os1Q9CTN5 574 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Tob2Q9JM55 345 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Foxo3Q9WVH4 672 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Enc1O35709 589 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Tnni2P13412 182 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Mcm5P49718 733 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 Clul1Q3ZRW6 464 aa12.11□□□□□ -0.47
Rnf40-206ENSMUST00000206914 CtcfQ61164 736 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms