RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Zbtb41Q811F1 908 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Traf3ip3Q8C0G2 513 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Bola3Q8CEI1 110 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Fam114a2Q8VE88 497 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Pcdha12Q91Y18 950 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Trpd52l3Q9CQ14 231 aa10.21□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Myo5cE9Q1F5 1742 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Art2bO35975 289 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zbtb7aO88939 569 aaKnown RBP10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 C87499Q3UX49 493 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tubb2aQ7TMM9 445 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cfap100Q80VN0 613 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tubb2bQ9CWF2 445 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ebag9Q9D0V7 213 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zcchc17Q9ESX4 241 aaKnown RBP10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 A0A1W2P7S8 802 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cdc5lQ6A068 802 aaKnown RBP10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 RragaQ80X95 313 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Pard3bQ9CSB4 1203 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Dbndd1Q9CZ00 160 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Iqgap3F8VQ29 1632 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Fmnl3Q6ZPF4 1028 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Kif17Q99PW8 1038 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Suclg2Q9Z2I8 433 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ccdc129Q14B48 1034 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ddb1Q3U1J4 1140 aaKnown RBP10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Lrrc36Q3V0M2 755 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Acap3Q6NXL5 833 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Gbp9Q8BTS3 619 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zc3h6Q8BYK8 1177 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cdc26Q99JP4 85 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 PalmdQ9JHU2 551 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Nub1P54729 614 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Rexo1Q7TT28 1213 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cyp2d12Q8BVD2 504 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ankk1Q8BZ25 745 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cabp7Q91ZM8 215 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 AticQ9CWJ9 592 aaKnown RBP10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Dusp10Q9ESS0 483 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Uhrf1bp1B2KF50 1429 aa10.2□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Capn2O08529 700 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Nek9Q8K1R7 984 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ttc1Q91Z38 292 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Pde6cQ91ZQ1 861 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 ShprhQ7TPQ3 1674 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Npc1l1Q6T3U4 1333 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Med23Q80YQ2 1367 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Sap30bpQ02614 308 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Kif5bQ61768 963 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Asic2Q925H0 512 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Fam84aQ9D650 292 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Nos1Q9Z0J4 1429 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 AceP09470 1312 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tldc2A2ACG1 198 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zfyve27Q3TXX3 415 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ddx49Q4FZF3 480 aaKnown RBP10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Oxr1Q4KMM3 866 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ehbp1Q69ZW3 1231 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Pcdhb2Q91Y00 799 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Xrcc4Q924T3 326 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Apol7aB2RT54 418 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Card10P58660 1021 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ubn1Q4G0F8 1135 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Maip1Q8BHE8 291 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 A0A1Y7VML8 143 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ccdc157Q5SPX1 718 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Morc2aQ69ZX6 1030 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ccz1Q8C1Y8 480 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cbx6Q9DBY5 414 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Rims1Q99NE5 1463 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ift20Q61025 132 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tmem119Q8R138 280 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Dpf1Q9QX66 387 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zranb2Q9R020 330 aaKnown RBP10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Depdc5P61460 1591 aa10.19□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tagap1P0CAX8 505 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Lins1Q3U1D0 764 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Fgfr1opQ66JX5 399 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zc4h2Q68FG0 224 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ces5aQ6AW46 575 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Kcnf1Q7TSH7 493 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Pard3Q99NH2 1333 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 1700029H14RikE9PY36 240 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Lrsam1Q80ZI6 727 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Depdc1bQ8BH88 529 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Cd209bQ8CJ91 325 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Klhl20Q8VCK5 604 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Efcc1Q9JJF6 558 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Zc3h18Q0P678 948 aaKnown RBP10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Hdac6Q9Z2V5 1149 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 MybP06876 636 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Armc2Q3URY6 854 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Tmtc2Q56A06 836 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 SncbQ91ZZ3 133 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Wdr17E9Q271 1322 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ighmbp2P40694 993 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Gpr182P43142 395 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Ncoa7Q6DFV7 943 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Gdap1l1Q8VE33 370 aa10.18□□□□□ -0.78
Scn8a-213ENSMUST00000201549 Rnf14Q9JI90 485 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms