RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Haus2Q9CQS9 234 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Mtmr7Q9Z2C9 660 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Pus7B7ZNL8 666 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Fam186bD3Z420 943 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Cyp2d34L7N463 504 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Magea1O89006 320 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Magea5O89009 320 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Map9Q3TRR0 646 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tmtc2Q56A06 836 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 PigsQ6PD26 555 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Lrrc41Q8K1C9 807 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 WaslQ91YD9 501 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ankrd1Q9CR42 319 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Magea2Q9R2A2 320 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tnrc6bQ8BKI2 1810 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Mageb2A2AHM0 380 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Kansl3A2RSY1 903 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Clec11aO88200 328 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 SsbP32067 415 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Llgl2Q3TJ91 1027 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Mns1Q61884 491 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Akap8Q9DBR0 687 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Xpo4Q9ESJ0 1151 aa12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Kif20bQ80WE4 1774 aaKnown RBP12.11□□□□□ -0.47
Msh3-202ENSMUST00000185852 Gucy1a2F8VQK3 730 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Pip4k2aO70172 405 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ripply1Q2WG77 201 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Phf23Q8BSN5 401 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Q8BZJ8 459 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Frat2Q8K025 231 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Tdrd3Q91W18 743 aaKnown RBP12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Nop2Q922K7 793 aaKnown RBP12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Plcb1Q9Z1B3 1216 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Exoc8Q6PGF7 716 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Riox2Q8CD15 465 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 HdlbpQ8VDJ3 1268 aaKnown RBP12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Yeats4Q9CR11 227 aaKnown RBP12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Etnk1Q9D4V0 363 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 GnptabQ69ZN6 1235 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Usp49Q6P9L4 685 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Nme8Q715T0 586 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Fbxo11Q7TPD1 930 aaKnown RBP12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Pde5aQ8CG03 865 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ddx39aQ8VDW0 427 aaKnown RBP12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ttll1Q91V51 423 aa12.1□□□□□ -0.47
Msh3-202ENSMUST00000185852 Rhpn1Q61085 643 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ncapg2Q6DFV1 1138 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Washc1Q8VDD8 475 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Gm7356A0A087WSA6 508 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Armc3A2AU72 881 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Zfp341Q6PGC9 846 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 DpydQ8CHR6 1025 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Trex1Q91XB0 314 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ubn2Q80WC1 1314 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Npy5rO70342 466 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Cfap157Q0VFX2 523 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 L1td1Q587J6 782 aaKnown RBP12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Kdm1aQ6ZQ88 853 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ercc6lQ8BHK9 1240 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Ccdc12Q8R344 166 aaKnown RBP12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Snw1Q9CSN1 536 aaKnown RBP12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Hic2Q9JLZ6 619 aaKnown RBP12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 Col16a1Q8BLX7 1580 aa12.09□□□□□ -0.47
Msh3-202ENSMUST00000185852 MycP01108 439 aa12.08□□□□□ -0.47
Msh3-202ENSMUST00000185852 Rapgef1Q3UHC1 1224 aa12.08□□□□□ -0.47
Msh3-202ENSMUST00000185852 LrmpQ60664 539 aa12.08□□□□□ -0.47
Msh3-202ENSMUST00000185852 Hirip3Q8BLH7 601 aa12.08□□□□□ -0.47
Msh3-202ENSMUST00000185852 Caps2Q8BUG5 550 aa12.08□□□□□ -0.47
Msh3-202ENSMUST00000185852 Appl2Q8K3G9 662 aa12.08□□□□□ -0.47
Msh3-202ENSMUST00000185852 Map1bP14873 2464 aaKnown RBP12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Ift172Q6VH22 1749 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 GabreA2AMW3 916 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Fkbp1aP26883 108 aaKnown RBP12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Tnnt2P50752 301 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Frat1P70339 274 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Nbr1P97432 988 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Uri1Q3TLD5 531 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Ppil4Q9CXG3 492 aaKnown RBP12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Mei1Q9D4I2 1268 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 WaplQ65Z40 1200 aaKnown RBP12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Arid5bQ8BM75 1188 aaKnown RBP12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Ccdc113Q8C5T8 377 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Tmod4Q9JLH8 345 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Nlrp5Q9R1M5 1163 aa12.08□□□□□ -0.48
Msh3-202ENSMUST00000185852 Prdm2A2A7B5 1709 aaKnown RBP12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Gm36210A0A1B0GS00 229 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Gimd1E9PW74 217 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Rrp1P56183 494 aaKnown RBP12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Exosc10P56960 887 aaKnown RBP12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Cep112Q5PR68 954 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Tmem132dQ76HP3 1097 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Fbxo2Q80UW2 297 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Rnaseh2aQ9CWY8 301 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Desi2Q9D291 194 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Ercc4Q9QZD4 917 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Bcl9Q9D219 1425 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 RictorQ6QI06 1708 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Tal1P22091 329 aa12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Sfi1Q3UZY0 1216 aaKnown RBP12.07□□□□□ -0.48
Msh3-202ENSMUST00000185852 Tas2r124Q7M718 309 aa12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms