RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Atp2b4Q6Q477 1205 aa15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Apobec3Q99J72 440 aaKnown RBP15.31■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Phldb3E9QAF4 648 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Usp5P56399 858 aaKnown RBP15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tmtc2Q56A06 836 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Cyp7b1Q60991 507 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Ppp2r5bQ6PD28 497 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Cdca8Q8BHX3 289 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Trmt2aQ8BNV1 574 aaKnown RBP15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Zfp202Q8C879 641 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Zbed3Q9D0L1 228 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Gm10134F6ZQC6 126 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Mars2Q499X9 586 aaKnown RBP15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tspyl4Q8VD63 406 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Zfp831A2ADM8 1628 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Nfil3O08750 462 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Gtf2f1Q3THK3 508 aaKnown RBP15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Myo19Q5SV80 963 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Zbtb39Q6PDK0 712 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Pdzph1Q8BGR1 1238 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 SpidrQ8BGX7 933 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tmx1Q8VBT0 278 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Klf15Q9EPW2 415 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Hic2Q9JLZ6 619 aaKnown RBP15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Magi2Q9WVQ1 1275 aa15.3■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Ifi207E9Q3L4 978 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Prpf4bQ61136 1007 aaKnown RBP15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Mei4Q8BRM6 389 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Q8K2W9 541 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Adam7O35227 789 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 C87499Q3UX49 493 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Fam43aQ8BUP8 424 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Dnm3Q8BZ98 863 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Xrcc4Q924T3 326 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Sept14Q9DA97 430 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Col5a2Q3U962 1497 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Zfp646Q6NV66 1788 aa15.29■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Lmnb1P14733 588 aaKnown RBP15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 CrkQ64010 304 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tango6Q8C3S2 1079 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Ddx41Q91VN6 622 aaKnown RBP15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Large1Q9Z1M7 756 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Lbhd1A0A087WPA0 259 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Surf1P09925 306 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Usp49Q6P9L4 685 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Mboat7Q8CHK3 473 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Cd248Q91V98 765 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Stxbp4Q9WV89 557 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Myh8P13542 1937 aa15.28■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Ces1aE9PYP1 563 aa15.27■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Vmn2r68L7N2B3 851 aa15.27■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tpm1P58771 284 aa15.27■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Armc2Q3URY6 854 aa15.27■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Tcp11l1Q8BTG3 509 aa15.27■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Lamb1P02469 1786 aa15.27■□□□□ 0.04
Rnf4-204ENSMUST00000182047 Pfkfb3A7UAK5 555 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Fam186bD3Z420 943 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Gucy1a2F8VQK3 730 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ampd3O08739 766 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Serpinb6bO08804 377 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Znf532Q6NXK2 1036 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Dpp8Q80YA7 892 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Kiaa1524Q8BWY9 907 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Rec8Q8C5S7 591 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ciapin1Q8WTY4 309 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Vps16Q920Q4 839 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Fam114a1Q9D281 569 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Akap8Q9DBR0 687 aaKnown RBP15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Trmt112Q9DCG9 125 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Zkscan5Q9Z1D8 819 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ktn1Q61595 1327 aaKnown RBP15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Gm43738A0A0G2JEA5 862 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Zscan18E9PUD6 809 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Arhgef16Q3U5C8 713 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 MyrflQ3UN70 904 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ctdspl2Q8BG15 465 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Vps18Q8R307 973 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Nop2Q922K7 793 aaKnown RBP15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Trim11Q99PQ2 467 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ubxn8Q9QZ49 277 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Homer1Q9Z2Y3 366 aa15.27■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Kcna1P16388 495 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Anks1aP59672 1150 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Vgll3P85442 326 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 ErfeQ6PGN1 340 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 RbsnQ80Y56 783 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Znf428Q8C1M2 176 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ppp1r11Q8K1L5 131 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Atxn7Q8R4I1 867 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Dapk3O54784 448 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Vcam1P29533 739 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Kcnj4P52189 445 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ift122Q6NWV3 1182 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Ddx31Q6NZQ2 687 aaKnown RBP15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Pip5kl1Q6U7H8 395 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Kctd3Q8BFX3 815 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Nod2Q8K3Z0 1020 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Dnaaf4Q8R368 420 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Yipf1Q91VU1 306 aa15.26■□□□□ 0.03
Rnf4-204ENSMUST00000182047 Zswim8Q3UHH1 1832 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms