RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Anapc5Q8BTZ4 740 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 2310002L09RikQ9D7L5 217 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fam217aQ9D9W6 419 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zbtb43Q9DAI4 467 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tbc1d2bQ3U0J8 965 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ap5z1Q3U829 807 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Krt12Q64291 487 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tspan9Q8BJU2 239 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Scgb2b18A0A087WPA9 112 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Trim80Q3V061 624 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Capn12Q9ER56 720 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rgs22G3UYX5 1258 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cdk4P30285 303 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 EsrrgP62509 458 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Clec4gQ8BNX1 294 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cplx3Q8R1B5 158 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Lrrc59Q922Q8 307 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 PtprkP35822 1457 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Trim12cD3Z3L3 497 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ddit3P35639 168 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fbln2P37889 1221 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rbm43Q99J64 343 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Serpinc1P32261 465 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fam170aQ66LM6 333 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Jade3Q6IE82 823 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Speer4dL7N216 212 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ptpn14Q62130 1189 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Wdr35Q8BND3 1181 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Klc3Q91W40 508 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Nop56Q9D6Z1 580 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Kif23E9Q5G3 953 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rps6ka1P18653 724 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Apobec2Q9WV35 224 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Naip6Q9JIB6 1403 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Mmp8O70138 465 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pak1O88643 545 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Nat1P50294 290 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pfkfb1P70266 471 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Nlrp2Q4PLS0 1046 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Galntl5Q9D4M9 431 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Znf394Q9Z1D9 521 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 CoblQ5NBX1 1337 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 A0A1W2P6Q8 802 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gm9048A0A1W2P7H4 802 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 A0A1W2P7S8 802 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 A0A1W2P7Z8 802 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gm9046A0A1W2P855 802 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zfy1P10925 782 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 SpertQ32MG2 446 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gm5935Q497S0 212 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Cdc5lQ6A068 802 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Dyrk4Q8BI55 632 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 HdlbpQ8VDJ3 1268 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Sirt1Q923E4 737 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Abcf2Q99LE6 628 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Chmp2aQ9DB34 222 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Epb41l2O70318 988 aaKnown RBP6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tm6sf1P58749 370 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Arel1Q8CHG5 823 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tubgcp2Q921G8 905 aa6.72□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Serpinb6dQ3UWK8 375 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Fam228aQ8CDW1 299 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Mettl5Q8K1A0 209 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Ankrd50F7BE84 1390 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gpr161B2RPY5 545 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Tmem165P52875 323 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Rgl1Q60695 768 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Pcdhb15Q91Y04 786 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zbtb40Q6PCS8 1258 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Abhd8Q8R0P8 439 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Gm4985A2ALC6 410 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Stk10O55098 966 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Scp2P32020 547 aaKnown RBP6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Srrm3Q80WV7 648 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Zfp113Q8C689 439 aa6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 AdarQ99MU3 1178 aaKnown RBP6.71□□□□□ -1.33
Ubr4-212ENSMUST00000165860 Scgb2b11A0A087WR49 112 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 DgkiD3YWQ0 1071 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Ctnna2Q61301 953 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Asic1Q6NXK8 526 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Ckap2lQ7TS74 745 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Pex5lQ8C437 567 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Znf24Q91VN1 368 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Trim66Q924W6 1242 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Mrfap1Q9CQL7 125 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Dkk3Q9QUN9 349 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Ddx25Q9QY15 484 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Map3k7Q62073 579 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Rbm12b2Q66JV4 834 aaKnown RBP6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Pcdha7Q91Y13 937 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Capn9Q9D805 690 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Rabgef1Q9JM13 491 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Eef1bO70251 225 aaKnown RBP6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Pdha1P35486 390 aaKnown RBP6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Tdo2P48776 406 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Ddx55Q6ZPL9 600 aaKnown RBP6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Sh2b1Q91ZM2 756 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 AvenQ9D9K3 342 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Pik3ap1Q9EQ32 811 aa6.71□□□□□ -1.34
Ubr4-212ENSMUST00000165860 Msh6P54276 1358 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 88.5 ms