RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Col2a1P28481 1487 aa21.36■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Upf2A2AT37 1269 aaKnown RBP21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Bnip3O55003 187 aa21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Defa-rs2P17534 91 aa21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 ZyxQ62523 564 aa21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Edrf1Q6GQV7 1239 aa21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Kctd3Q8BFX3 815 aa21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Sf3a1Q8K4Z5 791 aaKnown RBP21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Defb15Q8R2I5 79 aa21.35■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Astn1Q61137 1302 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Cep290Q6A078 2472 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Mia3Q8BI84 1930 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 R3hdm1E9Q9Q2 1135 aaKnown RBP21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Irs1P35569 1233 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Hmgcs2P54869 508 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Prpf38aQ4FK66 312 aaKnown RBP21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Ecm1Q61508 559 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Cypt4Q6P925 153 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Alas1Q8VC19 642 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Tomm70Q9CZW5 611 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Prkab1Q9R078 270 aa21.34■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Lamb2Q61292 1799 aa21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Sema3fO88632 785 aa21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Hoxc10P31257 342 aa21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 GlrbP48168 496 aa21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Nol8Q3UHX0 1147 aaKnown RBP21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Kiaa1328Q6NZK5 612 aa21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Ppil4Q9CXG3 492 aaKnown RBP21.33■■□□□ 1.01
Sqstm1-205ENSMUST00000143379 Dock2Q8C3J5 1828 aa21.32■■□□□ 1
Sqstm1-205ENSMUST00000143379 Art2aP17981 287 aa21.32■■□□□ 1
Sqstm1-205ENSMUST00000143379 Col9a1Q05722 921 aa21.32■■□□□ 1
Sqstm1-205ENSMUST00000143379 Usp38Q8BW70 1042 aa21.32■■□□□ 1
Sqstm1-205ENSMUST00000143379 Capns2Q9D7J7 247 aa21.32■■□□□ 1
Sqstm1-205ENSMUST00000143379 Tle2Q9WVB2 767 aa21.32■■□□□ 1
Sqstm1-205ENSMUST00000143379 Znf521Q6KAS7 1311 aa21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Ncbp1Q3UYV9 790 aaKnown RBP21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Fam109aQ8BH49 266 aa21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Phtf2Q8CB19 747 aa21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Adnp2Q8CHC8 1165 aaKnown RBP21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Ca9Q8VHB5 437 aa21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Sppl3Q9CUS9 384 aa21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 Sh2b2Q9JID9 621 aa21.31■■□□□ 1
Sqstm1-205ENSMUST00000143379 NfkbieO54910 364 aa21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 VrtnQ3SYK4 740 aa21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Usp17leQ7M764 540 aa21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Supt20hQ7TT00 530 aaKnown RBP21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Serpinb13Q8CDC0 389 aa21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Onecut3Q8K557 490 aa21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Eif2s2Q99L45 331 aaKnown RBP21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Dynll2Q9D0M5 89 aa21.3■■□□□ 1
Sqstm1-205ENSMUST00000143379 Skint3A7TZF0 458 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Flot1O08917 428 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Guca2bO09051 106 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Defb25Q30KN8 71 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Gas6Q61592 674 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Trim27Q62158 513 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Recql4Q75NR7 1216 aaKnown RBP21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Tpcn2Q8BWC0 731 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Lrrc56Q8K375 552 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Ppp2r3dQ9Z176 491 aa21.29■■□□□ 1
Sqstm1-205ENSMUST00000143379 Fam186bD3Z420 943 aa21.28■■□□□ 1
Sqstm1-205ENSMUST00000143379 Gp6P0C191 313 aa21.28■■□□□ 1
Sqstm1-205ENSMUST00000143379 Ccl5P30882 91 aa21.28■■□□□ 1
Sqstm1-205ENSMUST00000143379 HibadhQ99L13 335 aaKnown RBP21.28■■□□□ 1
Sqstm1-205ENSMUST00000143379 Mxra8Q9DBV4 442 aa21.28■■□□□ 1
Sqstm1-205ENSMUST00000143379 1110002E22RikE0CYV9 1786 aa21.28■■□□□ 1
Sqstm1-205ENSMUST00000143379 Duxf3A0A0N4SV92 674 aa21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Tmem265E9Q8G3 109 aa21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Cd72P21855 354 aa21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Fbxo28Q8BIG4 368 aa21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Golim4Q8BXA1 655 aa21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Vmn1r203Q8R273 311 aa21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Smarca5Q91ZW3 1051 aaKnown RBP21.27■■□□□ 1
Sqstm1-205ENSMUST00000143379 Tbc1d4Q8BYJ6 1307 aa21.27■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Naaladl2A0A0N4SUJ3 795 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Zscan4-ps1A0A1C7CYV3 506 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Vmn2r68L7N2B3 851 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 EnamO55196 1274 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Rnpc3Q3UZ01 514 aaKnown RBP21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Il17raQ60943 864 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Dpp8Q80YA7 892 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Olfm5Q8BU90 496 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 RnpepQ8VCT3 650 aaKnown RBP21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 HnrnpuQ8VEK3 800 aaKnown RBP21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Spred2Q924S7 410 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Pold4Q9CWP8 107 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Rnf123Q5XPI3 1314 aa21.26■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Obsl1D3YYU8 1804 aaKnown RBP21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 RarbP22605 482 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Aak1Q3UHJ0 959 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Fam228bQ497Q6 232 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Zbtb7bQ64321 544 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Znf280dQ68FE8 974 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 BcrQ6PAJ1 1270 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Mrpl58Q8R035 206 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Ccdc39Q9D5Y1 937 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Aox3G3X982 1335 aa21.25■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 TicrrQ8BQ33 1889 aa21.24■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 Supt3B0QZW4 406 aa21.24■□□□□ 0.99
Sqstm1-205ENSMUST00000143379 EomesO54839 707 aa21.24■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms