RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 NapbP28663 298 aa12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 MyzapQ3UIJ9 466 aa12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ccdc93Q7TQK5 629 aa12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ppfibp1Q8C8U0 969 aaKnown RBP12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ccdc73Q8CDM4 1066 aa12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cwc15Q9JHS9 229 aaKnown RBP12.15□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gm42641I6L9G2 585 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Casp12O08736 419 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Kcnb1Q03717 857 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Sun3Q5SS91 320 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Nab2Q61127 525 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ift88Q61371 824 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 AtripQ8BMG1 785 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Smc2Q8CG48 1191 aaKnown RBP12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Anapc4Q91W96 807 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Dpf1Q9QX66 387 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Dnai2A2AC93 623 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 CrcpO35427 148 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Sox5P35710 763 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Vsnl1P62761 191 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cyp7b1Q60991 507 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Glis3Q6XP49 780 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gimap8Q75N62 688 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Slitrk3Q810B9 980 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Csrnp2Q8BGQ2 534 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cdc23Q8BGZ4 597 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Enox1Q8BHR2 643 aaKnown RBP12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Tbx22Q8K402 517 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Amhr2Q8K592 568 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 CpzQ8R4V4 654 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ces1dQ8VCT4 565 aa12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rbm5Q91YE7 815 aaKnown RBP12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 SarnpQ9D1J3 210 aaKnown RBP12.14□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Adssl1P28650 457 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 SsbP32067 415 aaKnown RBP12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Foxp1P58462 705 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 GscQ02591 256 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Slc7a1Q09143 622 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ccdc174Q3U155 467 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Suds3Q8BR65 328 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Hgh1Q8C3I8 393 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Taf6lQ8R2K4 616 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gpr108Q91WD0 569 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 NenfQ9CQ45 171 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Hic2Q9JLZ6 619 aaKnown RBP12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gm11983V9GXS8 105 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Plbd2Q3TCN2 594 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 MmeQ61391 750 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Lrrc1Q80VQ1 524 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Mta1Q8K4B0 715 aaKnown RBP12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Pcdha7Q91Y13 937 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Sh2b1Q91ZM2 756 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 IcoslgQ9JHJ8 322 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Setdb1O88974 1307 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Tnni2P13412 182 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Krt86P97861 486 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Fam198bQ3UPI1 517 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cep112Q5PR68 954 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Dusp9Q7TNL7 452 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Clec16aQ80U30 1036 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Sirt2Q8VDQ8 389 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Uap1Q91YN5 522 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rbm43Q99J64 343 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Thap2Q9D305 217 aa12.13□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Npy5rO70342 466 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rtkn2Q14B46 604 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ccdc40Q8BI79 1192 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 CpvlQ9D3S9 478 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Plekho1Q9JIY0 408 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 GdaQ9R111 454 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Foxo3Q9WVH4 672 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Mroh6V9GX81 722 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 4931408C20RikE9PWP9 1381 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Plch1Q4KWH5 1682 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rsph10bE9PYQ0 876 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ampd3O08739 766 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 IkbkbO88351 757 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Abl1P00520 1123 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gucy2cQ3UWA6 1072 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Nek5Q7TSC3 627 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Pde5aQ8CG03 865 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Cgref1Q8R1U2 281 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Washc1Q8VDD8 475 aa12.12□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 LtbrP50284 415 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Eva1cP58659 440 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Ttc12Q8BW49 704 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Rbm28Q8CGC6 750 aaKnown RBP12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Klhl40Q9D783 621 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gja10Q9WUS4 505 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Myh2G3UW82 1942 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Gm10354K7N6A0 256 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Slc38a10Q5I012 1090 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Pram1Q6BCL1 675 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Fhod1Q6P9Q4 1197 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Slc44a1Q6X893 653 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Abtb2Q7TQI7 1024 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Wasf1Q8R5H6 559 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Mis18aQ9CZJ6 204 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Zfyve19Q9DAZ9 389 aa12.11□□□□□ -0.47
Prpf40b-202ENSMUST00000118287 Efcc1Q9JJF6 558 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms