RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Rhpn1Q61085 643 aa29.47■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Iqca1Q9CUL5 857 aa29.47■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Mrps25Q9D125 171 aaKnown RBP29.47■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Lmbr1Q9JIT0 490 aa29.47■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gm30191A0A0U1RNT7 187 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Eif6O55135 245 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Grin1P35438 938 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Bach1P97302 739 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 PRAG1Q571I4 1179 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gm2163Q6PCY5 473 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Kiaa1524Q8BWY9 907 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Erich6bQ9D4S6 220 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 VirmaA2AIV2 1811 aaKnown RBP29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Pitpnm2Q6ZPQ6 1335 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Mboat4P0C7A3 435 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gjb4Q02738 266 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gtf2f1Q3THK3 508 aaKnown RBP29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Zbtb39Q6PDK0 712 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Trim29Q8R2Q0 587 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Hmgn5Q9JL35 406 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Stxbp4Q9WV89 557 aa29.46■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Psmd14O35593 310 aa29.45■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gxylt1Q3UHH8 404 aa29.45■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gas2l3Q3UWW6 683 aa29.45■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Fez1Q8K0X8 392 aa29.45■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Atxn7Q8R4I1 867 aa29.45■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Calml3Q9D6P8 149 aa29.45■■■□□ 2.31
Tpm1-216ENSMUST00000113707 Gm43738A0A0G2JEA5 862 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Zscan29E9Q5B4 869 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Mybl2P48972 704 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Olfr119Q7TRJ5 321 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Cdan1Q8CC12 1239 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 SltmQ8CH25 1031 aaKnown RBP29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 CnpP16330 420 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Wnt7aP24383 349 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Kiaa1468Q148V7 1216 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Slc9a1Q61165 820 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Ift122Q6NWV3 1182 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 LRWD1Q8BUI3 648 aaKnown RBP29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Hdac9Q99N13 588 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Taf1dQ9D4V4 322 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 SmapQ9R0P4 181 aaKnown RBP29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Gm5114W4VSN8 858 aa29.44■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Atp2b1G5E829 1220 aa29.43■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Lrrd1Q8C0R9 853 aa29.43■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Ly6iQ9WU67 134 aa29.43■■■□□ 2.3
Tpm1-216ENSMUST00000113707 A0A0U1RNP2 1173 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Gtf3c3Q3TMP1 882 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Tbc1d9bQ5SVR0 1263 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Fam196bQ6GQV1 535 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Csrnp2Q8BGQ2 534 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Tor1aip2Q8BYU6 502 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Vps53Q8CCB4 832 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Gucy1a2F8VQK3 730 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Lilrb3P97484 841 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Gcnt1Q09324 428 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Haus6Q6NV99 933 aaKnown RBP29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Tmem60Q8K174 133 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Sel1lQ9Z2G6 790 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Homer1Q9Z2Y3 366 aa29.42■■■□□ 2.3
Tpm1-216ENSMUST00000113707 MthfslL7N466 203 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Kcna1P16388 495 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Clec16aQ80U30 1036 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Nod2Q8K3Z0 1020 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Apobec3Q99J72 440 aaKnown RBP29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Tomm22Q9CPQ3 142 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Borcs6Q9D6W8 360 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Inpp4aQ9EPW0 939 aa29.41■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Pabpc1lA2A5N3 607 aaKnown RBP29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Tbc1d2B1AVH7 922 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Cspp1B2RX88 1205 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Gm21969J3QJZ1 289 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Sema3fO88632 785 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Golph3lQ8R088 285 aaKnown RBP29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 TbcbQ9D1E6 244 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 GabreA2AMW3 916 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Brpf3B2KF05 1204 aaKnown RBP29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 SsbP32067 415 aaKnown RBP29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Ncf1Q09014 390 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Psmd1Q3TXS7 953 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Cep120Q7TSG1 988 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Arhgef6Q8K4I3 771 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Vps16Q920Q4 839 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Mmel1Q9JLI3 765 aa29.4■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Zfp853A0A1D5RM95 733 aa29.39■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Kctd3Q8BFX3 815 aa29.39■■■□□ 2.3
Tpm1-216ENSMUST00000113707 Btn2a2A4QPC6 514 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Klrk1O54709 232 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Aco1P28271 889 aaKnown RBP29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Luzp1Q8R4U7 1068 aaKnown RBP29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Tjap1Q9DCD5 539 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Gna11P21278 359 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Brip1Q5SXJ3 1174 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Clca4aQ6Q473 924 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Cep85Q8BMK0 761 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Polr2dQ9D7M8 142 aaKnown RBP29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Nr2e3Q9QXZ7 395 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Bcorl1A2AQH4 1781 aa29.38■■■□□ 2.29
Tpm1-216ENSMUST00000113707 C87499Q3UX49 493 aa29.37■■■□□ 2.29
Tpm1-216ENSMUST00000113707 Arhgef2Q60875 985 aa29.37■■■□□ 2.29
Retrieved 100 of 22,080 RNA–protein pairs in 118 ms