RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Ccdc178Q8CDV0 866 aa11.54□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Angel2Q8K1C0 544 aa11.54□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Atxn7Q8R4I1 867 aa11.54□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Igf2bp3Q9CPN8 579 aaKnown RBP11.54□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Q9CQ90 155 aa11.54□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Igf2rQ07113 2483 aaKnown RBP11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Klhl34A2AI76 644 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Clrn2B2RVW2 232 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Gm9992B2RWK3 458 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Stat1P42225 749 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Ccr5P51682 354 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Prpf38aQ4FK66 312 aaKnown RBP11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Psen2Q61144 448 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Fxr1Q61584 677 aaKnown RBP11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Fam170aQ66LM6 333 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 GnptabQ69ZN6 1235 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Unc93aQ710D3 458 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Ttll4Q80UG8 1193 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Tmem39bQ810L4 492 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Trmt2aQ8BNV1 574 aaKnown RBP11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Sik2Q8CFH6 931 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Pcdhb22Q91XZ8 794 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Bap1Q99PU7 728 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Gtf2ird1Q9JI57 1104 aaKnown RBP11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Cd2apQ9JLQ0 637 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Fzd9Q9R216 592 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Trpm7Q923J1 1863 aa11.53□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Map7d1A2AJI0 846 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Syce3B5KM66 88 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Nova2D3YVV7 556 aaKnown RBP11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Znf326O88291 580 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Slc27a3O88561 667 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Pde11aP0C1Q2 933 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Gadd45bP22339 160 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Pald1P70261 859 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Cpa2Q504N0 417 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Pwp2Q8BU03 919 aaKnown RBP11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Plekhg2Q6KAU7 1340 aa11.52□□□□□ -0.56
Tpm1-213ENSMUST00000113697 Med23Q80YQ2 1367 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 TicrrQ8BQ33 1889 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 ZxdbA2CE44 873 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Cyp2d34L7N463 504 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Exosc10P56960 887 aaKnown RBP11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Ccdc174Q3U155 467 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Lgr6Q3UVD5 967 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tbc1d9bQ5SVR0 1263 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tbc1d30Q69ZT9 766 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Rrp12Q6P5B0 1295 aaKnown RBP11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Rnf41Q8BH75 317 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 PaoxQ8C0L6 504 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Zfp113Q8C689 439 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Fbxo45Q8K3B1 286 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Iffo2Q8R2V2 512 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 HibadhQ99L13 335 aaKnown RBP11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Krt84Q99M73 603 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 BrapQ99MP8 591 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Dynll2Q9D0M5 89 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Zbtb43Q9DAI4 467 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tcea2Q9QVN7 299 aa11.52□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Rgs12Q8CGE9 1381 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Scn10aQ6QIY3 1958 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Fam186bD3Z420 943 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Vcam1P29533 739 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 PcQ05920 1178 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Fam178bQ24JP3 464 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Cnnm2Q3TWN3 875 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Ncbp1Q3UYV9 790 aaKnown RBP11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tmem130Q6NXM3 419 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Gm21985Q6P6P5 1106 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Bmt2Q8BXK4 403 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Rtn1Q8K0T0 780 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tut1Q8R3F9 869 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Chmp4cQ9D7F7 232 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Efcc1Q9JJF6 558 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 B3galt4Q9Z0F0 371 aa11.51□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Pcdh15Q99PJ1 1943 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Ano3A2AHL1 981 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Gm29094F6Q785 221 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Il7P10168 154 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tnni2P13412 182 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 PgfP49764 158 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 VrtnQ3SYK4 740 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Limch1Q3UH68 1057 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Tmprss11eQ5S248 423 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Leo1Q5XJE5 667 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Slc44a1Q6X893 653 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Prpf38bQ80SY5 542 aaKnown RBP11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 KhnynQ80U38 671 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Ncaph2Q8BSP2 607 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Nup88Q8CEC0 753 aaKnown RBP11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Gbp7Q91Z40 638 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 1700020D05RikQ99PB1 294 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Ddx20Q9JJY4 825 aaKnown RBP11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Zfp804bA0A0G2JGH6 1343 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Col2a1P28481 1487 aa11.5□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Fgl2P12804 432 aa11.49□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Gja8P28236 440 aa11.49□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Kif3aP28741 701 aa11.49□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Pkp1P97350 728 aaKnown RBP11.49□□□□□ -0.57
Tpm1-213ENSMUST00000113697 Znf667Q2TL60 609 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 878.7 ms