RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Arpp21Q9DCB4 807 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm14685Q52KH6 695 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Svs3bQ8BZH8 265 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ankrd2Q9WV06 328 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ccdc103Q9D9P2 237 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Mtx1P47802 317 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 GnpatP98192 678 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Hdac11Q91WA3 347 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Deaf1Q9Z1T5 566 aa18.18■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ddx39aQ8VDW0 427 aaKnown RBP18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gzf1Q4VBD9 706 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Lonrf3Q9D4H7 753 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Sgk1Q9WVC6 431 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 XpcP51612 930 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ankle2Q6P1H6 964 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Fam160b2Q80YR2 744 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 MycbpQ9EQS3 103 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 4930449I24RikQ9D5E3 319 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gins4Q99LZ3 223 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 MlxiplQ99MZ3 864 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm11985A0A1B0GS61 206 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 RpsaP14206 295 aaKnown RBP18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Mettl24Q8CCB5 363 aa18.17■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Tsc22d1P62500 1077 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Nlrx1Q3TL44 975 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Chpf2Q3UU43 768 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Acap2Q6ZQK5 770 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Pla2g4fQ50L41 855 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Pram1Q6BCL1 675 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 D130040H23RikQ8BII3 405 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Irak4Q8R4K2 459 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Maged2Q9ER67 616 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Raph1F2Z3U3 1266 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Fbxo41Q6NS60 873 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Zcchc8Q9CYA6 709 aaKnown RBP18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 LlphQ9D945 130 aaKnown RBP18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Lig1P37913 916 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Senp1P59110 640 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 InhbaQ04998 424 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Krt32Q62168 407 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Rassf6Q80UQ2 353 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 9230110C19RikQ8CC70 267 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Grpel1Q99LP6 217 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Tpcn1Q9EQJ0 817 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 OtulinQ3UCV8 352 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Atg16l1Q8C0J2 607 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Spdl1Q923A2 608 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Zscan18E9PUD6 809 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Hdac4Q6NZM9 1076 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Enox1Q8BHR2 643 aaKnown RBP18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Pole3Q9JKP7 145 aa18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 LrpprcQ6PB66 1392 aaKnown RBP18.16■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm3248K7N721 186 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Map3k7Q62073 579 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Sgsm2Q80U12 1005 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Plekha4Q8VC98 588 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 H2-OaQ9QWV1 250 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gipc2Q9Z2H7 314 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Akap5D3YVF0 745 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Gm1661E9Q963 441 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 NficP70255 439 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 SdsQ8VBT2 327 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Krt222Q8CCX5 294 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ribc1Q9D0B8 379 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Slc13a1Q9JHI4 594 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Arhgef10lA2AWP8 1280 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Rnaseh1O70338 285 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 NelfbQ8C4Y3 580 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 ParvbQ9ES46 365 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 RragaQ80X95 313 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Plcd1Q8R3B1 756 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Plcb4Q91UZ1 1175 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Trim8Q99PJ2 551 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Kdm8Q9CXT6 414 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ccdc77Q9CZH8 489 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Rlbp1Q9Z275 317 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Ptgs1P22437 602 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Grin1P35438 938 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 YwhaeP62259 255 aaKnown RBP18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Catsper1Q91ZR5 686 aa18.15■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Zfp850J3QPC5 689 aa18.14■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Slx4ipQ9D7Y9 413 aa18.14■□□□□ 0.5
Ubr3-202ENSMUST00000112251 Atf2P16951 487 aaKnown RBP18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Zfp251Q6PCX8 632 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Scyl2Q8CFE4 930 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 GsnP13020 780 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Dnajc25A2ALW5 357 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Ppp1r15aP17564 657 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Zscan2Q07230 614 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Esyt1Q3U7R1 1092 aaKnown RBP18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Agap2Q3UHD9 1186 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Pym1Q8CHP5 203 aaKnown RBP18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Nop2Q922K7 793 aaKnown RBP18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Efcab2Q9CQ46 164 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 SnrkQ8VDU5 748 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Ccnyl1D3YUJ3 367 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Pja1O55176 578 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Gna15P30678 374 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Ccdc162pQ0VG85 912 aa18.14■□□□□ 0.49
Ubr3-202ENSMUST00000112251 Carmil1Q6EDY6 1374 aa18.13■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms