RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Epha10Q8BYG9 1007 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 E2f4Q8R0K9 410 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Capn2O08529 700 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Mum1l1Q4VA55 681 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 TxlnaQ6PAM1 554 aaKnown RBP13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Phc3Q8CHP6 981 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 NsmfQ99NF2 532 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Znf638Q61464 1960 aaKnown RBP13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Calcoco2A2A6M5 331 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Rgs22G3UYX5 1258 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Mdh1P14152 334 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Smarca1Q6PGB8 1046 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Igsf3Q6ZQA6 1194 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Klhl10Q9D5V2 608 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 AmfrQ9R049 643 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Cyp26c1B2RXA7 518 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ube4aE9Q735 1028 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Lrrc6O88978 473 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Mdh1bQ5F204 500 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Q8BT18 775 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 NelfbQ8C4Y3 580 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Prc1Q99K43 603 aaKnown RBP12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gja10Q9WUS4 505 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Rhbdl3P58873 404 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Fam161bQ8CB59 589 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 LpxnQ99N69 386 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gpaa1Q9WTK3 621 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Letm1Q9Z2I0 738 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Pth1rP41593 591 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Aak1Q3UHJ0 959 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 1700018B08RikQ9DA83 213 aa12.99□□□□□ -0.33
Vps54-202ENSMUST00000109578 Stag2O35638 1231 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Cnga2Q62398 664 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Cdc23Q8BGZ4 597 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Hgh1Q8C3I8 393 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tmem60Q8K174 133 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Api5O35841 504 aaKnown RBP12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Snai1Q02085 264 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Traf3ip1Q149C2 625 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Map9Q3TRR0 646 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 LbrQ3U9G9 626 aaKnown RBP12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Madcam1Q61826 405 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Map3k11Q80XI6 850 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ppfibp1Q8C8U0 969 aaKnown RBP12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gimap7Q8R379 293 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Brms1Q99N20 246 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ttc14Q9CSP9 761 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Scrn1Q9CZC8 414 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Copb1Q9JIF7 953 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Cfap44E9Q5M6 1843 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 MeiocA2AG06 965 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 MthfslL7N466 203 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Pak1O88643 545 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 DSCC1Q14AI0 399 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Trim29Q8R2Q0 587 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Fam217aQ9D9W6 419 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Egfl6Q9JJZ5 550 aa12.98□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ulk4Q3V129 1303 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Apol7aB2RT54 418 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Nr5a1P33242 462 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ptpn12P35831 775 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Nkx2-5P42582 318 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Znhit6Q3UFB2 460 aaKnown RBP12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ankrd23Q812A3 306 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tube1Q9D6T1 475 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 EcsitQ9QZH6 435 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Uchl5Q9WUP7 329 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ppef2O35385 757 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 GpiP06745 558 aaKnown RBP12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tshz1Q5DTH5 1084 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ppp2r5bQ6PD28 497 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tacc1Q6Y685 774 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Hpcal4Q8BGZ1 191 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Smc1bQ920F6 1248 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gcom1E9PZ54 550 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gm4307E9PZY4 289 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gm4312K9J7E2 289 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 MyzapQ3UIJ9 466 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ctnna3Q65CL1 895 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Hdac4Q6NZM9 1076 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Cyp4f39Q8BGU0 532 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Spice1Q8C804 860 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Bicdl2Q8CHW5 507 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Klc3Q91W40 508 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Rrp1bQ91YK2 724 aaKnown RBP12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Sorbs3Q9R1Z8 733 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ltbp4Q8K4G1 1666 aa12.97□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tpp1O89023 562 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 PcQ05920 1178 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Dbndd1Q9CZ00 160 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Dynll2Q9D0M5 89 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gm28042B7ZCM9 1014 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Exoc3l2D3YUP5 789 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Rexo5D3YW29 759 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ccdc57Q6PHN1 1016 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Adck5Q80V03 582 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gpt2Q8BGT5 522 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Dact1Q8R4A3 778 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tmem39aQ9CYC3 486 aa12.96□□□□□ -0.33
Vps54-202ENSMUST00000109578 Calml3Q9D6P8 149 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 78.3 ms