RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Ncbp1Q3UYV9 790 aaKnown RBP12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 PRAG1Q571I4 1179 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Pdcl2Q78Y63 240 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Cep120Q7TSG1 988 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Kcnf1Q7TSH7 493 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Lca5Q80ST9 704 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Cep85Q8BMK0 761 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 IarsQ8BU30 1262 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Lrrd1Q8C0R9 853 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Hexim1Q8R409 356 aaKnown RBP12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Mtmr4Q91XS1 1190 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Vps16Q920Q4 839 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Polr2dQ9D7M8 142 aaKnown RBP12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Sept14Q9DA97 430 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Tfap4Q9JIZ5 338 aa12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Zswim8Q3UHH1 1832 aaKnown RBP12.28□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Cyp26c1B2RXA7 518 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Tex13cD3YU32 604 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Kcna1P16388 495 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Fbln2P37889 1221 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Trappc10Q3TLI0 1259 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Slc9a1Q61165 820 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Grm4Q68EF4 912 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Ddx31Q6NZQ2 687 aaKnown RBP12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Dpp8Q80YA7 892 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Pdzph1Q8BGR1 1238 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Ano10Q8BH79 659 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Vps53Q8CCB4 832 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Sox30Q8CGW4 782 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Nod2Q8K3Z0 1020 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Kcnk13Q8R1P5 405 aa12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Nop14Q8R3N1 860 aaKnown RBP12.27□□□□□ -0.44
Ttc39a-202ENSMUST00000106618 Grin2dQ03391 1323 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 A0A0U1RNP2 1173 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Api5O35841 504 aaKnown RBP12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 SsbP32067 415 aaKnown RBP12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Pex1Q5BL07 1284 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Scnn1aQ61180 699 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Tbc1d31Q6NXY1 996 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Kctd3Q8BFX3 815 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Nat10Q8K224 1024 aaKnown RBP12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Yipf1Q91VU1 306 aa12.27□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Zfp853A0A1D5RM95 733 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Aco1P28271 889 aaKnown RBP12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Lilrb3P97484 841 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Slc7a1Q09143 622 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Usp13Q5BKP2 858 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Zbtb39Q6PDK0 712 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Ppp1r11Q8K1L5 131 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Nrbp1Q99J45 535 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Ush1cQ9ES64 910 aa12.26□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Becn1O88597 448 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 LdhaP06151 332 aaKnown RBP12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Cacnb3P54285 484 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Lamc2Q61092 1191 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Ezh2Q61188 746 aaKnown RBP12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Glra4Q61603 456 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Dlg1Q811D0 905 aaKnown RBP12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 LRWD1Q8BUI3 648 aaKnown RBP12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Ciapin1Q8WTY4 309 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Calml3Q9D6P8 149 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Lmbr1Q9JIT0 490 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Cnpy2Q9QXT0 182 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Gm30191A0A0U1RNT7 187 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Pabpc1lA2A5N3 607 aaKnown RBP12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Tbc1d2B1AVH7 922 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Ccdc85cE9Q6B2 420 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Arid4aF8VPQ2 1261 aaKnown RBP12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Eif6O55135 245 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Cdh15P33146 784 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Nbr1P97432 988 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Spata18Q0P557 537 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 CbarpQ66L44 698 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Cnnm4Q69ZF7 771 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Tmc4Q7TQ65 694 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Ankrd1Q9CR42 319 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Dctpp1Q9QY93 170 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Gm5114W4VSN8 858 aa12.25□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Pitpnm2Q6ZPQ6 1335 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Flvcr1B2RXV4 560 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Tmem132bF7BAB2 1078 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Sema3fO88632 785 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Tpm3P21107 285 aaKnown RBP12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Slc10a5Q5PT54 434 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Large2Q5XPT3 690 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Rhpn1Q61085 643 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Fam196bQ6GQV1 535 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Rrp12Q6P5B0 1295 aaKnown RBP12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Luc7l2Q7TNC4 392 aaKnown RBP12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Clic6Q8BHB9 596 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Tubgcp2Q921G8 905 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Scrn1Q9CZC8 414 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Nr2e3Q9QXZ7 395 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Atp12aQ9Z1W8 1035 aa12.24□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Cdc27A2A6Q5 825 aa12.23□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Btn2a2A4QPC6 514 aa12.23□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Olfr247E9PVJ7 320 aa12.23□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Olfr819K7N727 320 aa12.23□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Cavin1O54724 392 aa12.23□□□□□ -0.45
Ttc39a-202ENSMUST00000106618 Arhgef2Q60875 985 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms